Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AP003392.2-201ENST00000527269 208 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 ZNF519P3-201ENST00000557158 1032 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 MTND1P15-201ENST00000579262 949 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 MTATP6P3-201ENST00000581686 676 ntBASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAPGEF3O95398 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.52□□□□□ -1.53
RAPGEF3O95398 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAPGEF3O95398 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RAPGEF3O95398 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAPGEF3O95398 Y_RNA.97-201ENST00000363094 102 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 RNU5E-5P-201ENST00000365379 116 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC019155.1-201ENST00000382242 574 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 RNU6-517P-201ENST00000384362 110 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 U3.19-201ENST00000390893 196 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 UBE2V1P10-201ENST00000414685 269 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 FNDC3CP-201ENST00000420795 1155 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC096751.1-202ENST00000502691 1067 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 TMEM251P1-201ENST00000503717 318 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC022447.3-201ENST00000506865 495 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 STMN1P2-201ENST00000508435 439 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC008694.2-201ENST00000517591 306 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC022790.1-201ENST00000522872 204 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AP002453.2-201ENST00000533503 320 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC008011.1-201ENST00000545989 227 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.51□□□□□ -1.53
RAPGEF3O95398 MIR4512-201ENST00000583257 77 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 MIR548AB-201ENST00000584917 84 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 BNIP3P23-201ENST00000599655 511 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC097468.3-201ENST00000607956 456 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AL357080.1-201ENST00000617394 239 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 AC093591.3-201ENST00000634516 308 ntBASIC5.51□□□□□ -1.53
RAPGEF3O95398 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAPGEF3O95398 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAPGEF3O95398 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAPGEF3O95398 DCAF13P1-201ENST00000495256 1330 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RAPGEF3O95398 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 ARF4P3-201ENST00000397387 509 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 EIF5P1-201ENST00000400019 1231 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 RNU2-66P-201ENST00000410650 161 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 RN7SKP247-201ENST00000411094 308 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 TPMTP2-201ENST00000414372 726 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC010975.2-201ENST00000427781 588 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 RPL7P28-201ENST00000437739 740 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 MTCO2P3-201ENST00000442543 421 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 snoU13.7-201ENST00000459220 104 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 SNORD42A-201ENST00000459584 64 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 RPL21P8-201ENST00000465083 535 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC084198.1-201ENST00000477747 402 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC090453.1-201ENST00000495560 436 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC068446.3-201ENST00000555285 382 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AL133457.1-201ENST00000564251 987 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 MIR5680-201ENST00000577577 84 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 MIR3936-201ENST00000584304 110 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 AL589743.7-201ENST00000612637 233 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC092794.1-201ENST00000612734 582 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC025588.4-201ENST00000615802 908 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC027807.2-201ENST00000616099 408 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 AC015871.5-202ENST00000623252 701 ntBASIC5.5□□□□□ -1.53
RAPGEF3O95398 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RAPGEF3O95398 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.5□□□□□ -1.53
RAPGEF3O95398 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RAPGEF3O95398 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.49□□□□□ -1.53
RAPGEF3O95398 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms