Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 SPATA31B1P-201ENST00000434692 4016 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.86□□□□□ -1.47
GFRA3O60609 RNA5SP234-201ENST00000363916 119 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 Y_RNA.217-201ENST00000364214 105 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 SMIM11P1-201ENST00000369586 178 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 RNU1-106P-201ENST00000384382 164 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 RNU6-905P-201ENST00000384434 107 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 RNU6-45P-201ENST00000384471 107 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA3O60609 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.86□□□□□ -1.47
GFRA3O60609 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.86□□□□□ -1.47
GFRA3O60609 CYCSP6-201ENST00000434498 302 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 AC092573.2-201ENST00000434546 243 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.86□□□□□ -1.47
GFRA3O60609 Y_RNA.641-201ENST00000459414 105 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 RNU6-612P-201ENST00000516909 102 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.86□□□□□ -1.47
GFRA3O60609 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.86□□□□□ -1.47
GFRA3O60609 AC108081.1-201ENST00000604358 221 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 MIR7973-1-201ENST00000614683 76 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 AC068647.1-201ENST00000489539 2265 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA3O60609 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA3O60609 AL365440.1-201ENST00000436135 2167 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
GFRA3O60609 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 AC018555.1-201ENST00000567548 1980 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
GFRA3O60609 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA3O60609 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA3O60609 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.85□□□□□ -1.47
GFRA3O60609 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 AL133243.4-201ENST00000623116 3109 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA3O60609 AC022819.1-201ENST00000563495 3910 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA3O60609 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA3O60609 Y_RNA.480-201ENST00000384364 102 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 MIR192-201ENST00000384915 110 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GFRA3O60609 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA3O60609 RPL21P40-201ENST00000428586 483 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 AL353691.1-201ENST00000451332 387 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.85□□□□□ -1.47
GFRA3O60609 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA3O60609 AL139099.1-201ENST00000497398 403 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 AC022616.8-201ENST00000533569 253 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA3O60609 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.85□□□□□ -1.47
GFRA3O60609 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.85□□□□□ -1.47
GFRA3O60609 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.85□□□□□ -1.47
GFRA3O60609 SNORA70D-201ENST00000578836 135 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 AC010463.3-201ENST00000594077 500 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 BDH2P1-201ENST00000602288 736 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 MIR3914-2-201ENST00000637339 95 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 SRRM1P3-201ENST00000426911 2678 ntBASIC5.85□□□□□ -1.47
GFRA3O60609 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA3O60609 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
GFRA3O60609 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA3O60609 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
GFRA3O60609 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
GFRA3O60609 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.85□□□□□ -1.47
GFRA3O60609 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
GFRA3O60609 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 AL021877.2-201ENST00000624442 10684 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA3O60609 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GFRA3O60609 RNU6-933P-201ENST00000384424 107 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 CTSL3P-202ENST00000412179 788 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 CYP4F32P-201ENST00000426492 504 ntBASIC5.84□□□□□ -1.47
GFRA3O60609 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.84□□□□□ -1.47
GFRA3O60609 AC092162.1-201ENST00000432828 434 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms