Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC107982.1-201ENST00000507171 1300 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LCMT2O60294 AL049780.3-201ENST00000624612 1583 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LCMT2O60294 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.18□□□□□ -1.9
LCMT2O60294 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 Y_RNA.25-201ENST00000362528 102 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 RNU6-636P-201ENST00000384598 107 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.18□□□□□ -1.9
LCMT2O60294 AC005019.1-201ENST00000436455 431 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.18□□□□□ -1.9
LCMT2O60294 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.18□□□□□ -1.9
LCMT2O60294 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.18□□□□□ -1.9
LCMT2O60294 VN1R10P-201ENST00000447106 875 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 MTND2P19-201ENST00000449129 1012 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.18□□□□□ -1.9
LCMT2O60294 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC092757.1-201ENST00000467293 467 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 HMGB1P25-201ENST00000468402 607 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 RPL7P38-201ENST00000488396 739 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.18□□□□□ -1.9
LCMT2O60294 HSPD1P15-201ENST00000505573 1122 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 MLLT10P2-201ENST00000506434 249 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 KLHL2P1-201ENST00000508691 521 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC010460.2-201ENST00000509054 677 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 TXNP6-201ENST00000510190 310 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC105914.1-201ENST00000511798 226 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 RNU6-27P-201ENST00000516146 107 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LCMT2O60294 AC008127.2-201ENST00000549925 1075 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC011611.1-201ENST00000552179 197 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.18□□□□□ -1.9
LCMT2O60294 AC015917.1-201ENST00000579654 510 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LCMT2O60294 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.18□□□□□ -1.9
LCMT2O60294 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.18□□□□□ -1.9
LCMT2O60294 CCDC58P3-201ENST00000590792 430 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC055876.5-201ENST00000605667 259 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC069200.1-201ENST00000609511 323 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC012314.7-201ENST00000619693 93 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC023510.2-201ENST00000622162 746 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 AC120349.2-201ENST00000625002 298 ntBASIC3.18□□□□□ -1.9
LCMT2O60294 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.18□□□□□ -1.9
LCMT2O60294 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
LCMT2O60294 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
LCMT2O60294 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
LCMT2O60294 AL079305.1-201ENST00000623159 3008 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
LCMT2O60294 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.17□□□□□ -1.9
LCMT2O60294 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LCMT2O60294 RNU4-92P-201ENST00000363783 136 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 Y_RNA.192-201ENST00000363977 102 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 RNU6-560P-201ENST00000364007 108 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AL590084.1-201ENST00000407885 387 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 RNU6-55P-201ENST00000411092 107 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 RNU6-954P-201ENST00000411355 107 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 ATP5C1P1-201ENST00000441945 895 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LCMT2O60294 PTENP1-201ENST00000447117 1215 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC020699.1-201ENST00000505161 445 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 SNORA31.8-201ENST00000516327 108 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.17□□□□□ -1.9
LCMT2O60294 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC125611.1-201ENST00000549563 229 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 EEF1B2P4-201ENST00000551398 348 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.17□□□□□ -1.9
LCMT2O60294 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.17□□□□□ -1.9
LCMT2O60294 RPL21P12-201ENST00000559810 515 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.17□□□□□ -1.9
LCMT2O60294 COX6CP3-201ENST00000580869 223 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.17□□□□□ -1.9
LCMT2O60294 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.17□□□□□ -1.9
LCMT2O60294 BNIP3P26-201ENST00000600827 554 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC231759.1-201ENST00000616455 597 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 AC091925.2-201ENST00000625059 256 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.17□□□□□ -1.9
LCMT2O60294 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.17□□□□□ -1.9
LCMT2O60294 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LCMT2O60294 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LCMT2O60294 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LCMT2O60294 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.17□□□□□ -1.9
LCMT2O60294 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms