Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 CFTRP1-201ENST00000456646 183 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 RPL7P15-201ENST00000461190 712 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 RN7SL585P-201ENST00000470538 280 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXC11O43248 PPIAP15-201ENST00000479662 484 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 BET1P1-201ENST00000482276 359 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 RPL7P23-201ENST00000493874 747 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC11O43248 VN1R104P-201ENST00000505115 1009 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXC11O43248 RN7SKP289-201ENST00000517244 295 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 PAICSP4-201ENST00000517543 1253 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AC092851.1-201ENST00000535964 478 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXC11O43248 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC11O43248 AC087499.8-201ENST00000578406 226 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC11O43248 AL109653.1-201ENST00000603091 248 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 PRELID3BP8-201ENST00000604148 295 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AL158211.4-201ENST00000606988 584 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AL391497.1-201ENST00000608671 547 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AC106028.5-201ENST00000610332 395 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AL121772.2-201ENST00000614331 297 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AL355810.1-201ENST00000614629 552 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXC11O43248 AL139089.1-201ENST00000620372 975 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 MIR6075-201ENST00000620782 95 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AC103858.2-201ENST00000621471 543 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AL353748.2-201ENST00000622148 471 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 AC091931.1-201ENST00000623488 728 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXC11O43248 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC11O43248 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC11O43248 AP001148.1-201ENST00000624124 2359 ntBASIC4.04□□□□□ -1.76
HOXC11O43248 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC11O43248 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXC11O43248 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC11O43248 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC11O43248 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXC11O43248 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC11O43248 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC11O43248 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC11O43248 RNU5F-7P-201ENST00000363696 115 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC11O43248 U1.1-201ENST00000384101 164 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 U3.20-201ENST00000390909 217 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 AL031577.2-201ENST00000404133 280 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 RNU6-920P-201ENST00000410926 92 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 RPL7AP73-201ENST00000413490 353 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 SSXP9-201ENST00000417503 292 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 AC004866.2-201ENST00000438285 481 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 AC083863.1-201ENST00000438811 231 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC11O43248 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC11O43248 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC11O43248 UBDP1-202ENST00000457888 382 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 RPL21P11-201ENST00000461458 483 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 AC034236.1-201ENST00000469891 373 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC11O43248 RNA5SP468-201ENST00000516782 93 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 RNA5SP143-201ENST00000516936 115 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC11O43248 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC11O43248 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC11O43248 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXC11O43248 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXC11O43248 AC068313.1-201ENST00000604028 1008 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC11O43248 AC005344.1-201ENST00000613391 459 ntBASIC4.03□□□□□ -1.76
HOXC11O43248 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC11O43248 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC11O43248 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC11O43248 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HOXC11O43248 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC11O43248 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC11O43248 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC11O43248 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC11O43248 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC11O43248 AL513185.3-201ENST00000433335 1300 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC11O43248 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC11O43248 RNA5SP322-201ENST00000363617 119 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 RNU6-501P-201ENST00000364072 100 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 MIR200C-201ENST00000384980 68 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 RNU6-328P-201ENST00000390887 106 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 SNORA3C-201ENST00000408792 125 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 AL359704.1-201ENST00000411586 781 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 RAB9AP3-201ENST00000412737 573 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC11O43248 AC109780.2-201ENST00000413467 845 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 RPS27AP14-201ENST00000422868 454 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 AL512649.1-201ENST00000428997 581 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC11O43248 MED14P1-201ENST00000430517 648 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 AC091862.1-201ENST00000438016 1100 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 THAP5P1-201ENST00000439089 262 ntBASIC4.02□□□□□ -1.77
HOXC11O43248 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms