Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 MLLT10P2-201ENST00000506434 249 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 KLHL2P1-201ENST00000508691 521 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 RNY4P37-201ENST00000516225 96 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 OR5AP1P-201ENST00000529730 940 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 SNRPGP16-201ENST00000533275 226 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC024224.1-201ENST00000538284 609 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 HIGD1AP17-201ENST00000554576 276 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 MIR3200-201ENST00000580767 85 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC027449.1-201ENST00000608890 407 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AL442067.2-201ENST00000614033 363 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC018816.2-201ENST00000621460 353 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC090772.4-201ENST00000623599 362 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AF117829.1-206ENST00000621883 3802 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 AC099786.3-201ENST00000565735 1410 ntBASIC3.18□□□□□ -1.9
NPIPA2E9PIF3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 FRG1CP-201ENST00000358464 769 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 RNU6-1122P-201ENST00000384449 107 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AL591034.1-201ENST00000407447 340 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 HSFY4P-201ENST00000415994 1181 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 PTENP1-201ENST00000447117 1215 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 OFD1P3Y-201ENST00000453312 783 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 USP9YP34-201ENST00000453983 808 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AP000563.1-201ENST00000490865 758 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 TMEM251P1-201ENST00000503717 318 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 SNORA31.8-201ENST00000516327 108 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 SNORA74D-201ENST00000516404 141 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC006518.1-201ENST00000541449 943 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AL121576.1-201ENST00000556055 276 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 MTCO3P24-201ENST00000572729 782 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC245036.5-201ENST00000596330 847 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC131235.4-201ENST00000609288 620 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC243773.3-201ENST00000613270 256 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC107075.1-201ENST00000613695 314 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AL110115.1-201ENST00000614396 364 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 AC095031.1-201ENST00000623685 672 ntBASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NPIPA2E9PIF3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 RPL7P26-201ENST00000333817 754 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 OR5H2-201ENST00000355273 945 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 Y_RNA.192-201ENST00000363977 102 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 RNA5SP42-201ENST00000364278 115 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 RNU6-283P-201ENST00000364788 107 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 Y_RNA.465-201ENST00000384293 102 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 RNU6-636P-201ENST00000384598 107 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 RPL17P50-201ENST00000396131 546 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 RN7SKP285-201ENST00000410137 318 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 BX323014.1-201ENST00000412876 237 ntBASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.16□□□□□ -1.9
NPIPA2E9PIF3 YPEL5P1-201ENST00000419731 367 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms