Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 AC091057.2-201ENST00000602594 792 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 AC068790.3-201ENST00000602988 553 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 AL356280.1-201ENST00000603614 379 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 AC090740.1-201ENST00000623193 2262 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 RNU6-253P-201ENST00000384730 105 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 RPL31P52-201ENST00000407532 367 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC007182.2-201ENST00000489251 402 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AADACP1-206ENST00000561502 1193 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AMZ2P1-203ENST00000565833 850 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC135628.1-201ENST00000568867 534 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 RPP40P2-201ENST00000603596 712 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 KATNBL1P1-201ENST00000605192 748 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC018754.1-201ENST00000607486 925 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 AC104307.1-201ENST00000616142 196 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 PABPC1P9-201ENST00000426076 1612 ntBASIC1.69□□□□□ -2.14
CPSF4LA6NMK7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 RN7SKP226-201ENST00000364912 300 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 RNA5SP88-201ENST00000365560 109 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 HSPE1P1-201ENST00000421494 318 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 AL451074.3-201ENST00000437709 472 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 MTCO2P9-201ENST00000503214 694 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 AC119751.5-201ENST00000514077 770 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 AC110994.2-201ENST00000635481 492 ntBASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.68□□□□□ -2.14
CPSF4LA6NMK7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 RNU1-101P-201ENST00000391171 127 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 RSL24D1P4-201ENST00000400938 484 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 AL035407.1-201ENST00000429211 571 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 FABP5P13-201ENST00000452144 328 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 PSMA6P4-201ENST00000603247 718 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 MTND4P34-201ENST00000572715 1371 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 AL136164.4-201ENST00000625013 2135 ntBASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF4LA6NMK7 MTND5P29-201ENST00000458676 1807 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AL079342.1-201ENST00000401460 267 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AL139413.1-201ENST00000421309 217 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 RN7SKP5-201ENST00000517045 272 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 BNIP3P19-201ENST00000605397 577 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AC087241.4-201ENST00000612441 480 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AL356274.1-201ENST00000617064 410 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 AL158801.5-201ENST00000623123 465 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 KPNA2P1-201ENST00000458289 1591 ntBASIC1.66□□□□□ -2.14
CPSF4LA6NMK7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC116096.1-201ENST00000566804 2314 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 MIR92A2-201ENST00000385299 75 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AL445529.1-201ENST00000398713 389 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 GSTA9P-201ENST00000406231 611 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 BX682237.1-201ENST00000415016 335 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC008173.1-201ENST00000418901 264 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC013268.2-201ENST00000420753 337 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms