Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL356489.2-201ENST00000566968 3528 ntBASIC5.17□□□□□ -1.58
CCDC85CA6NKD9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 MTND5P1-201ENST00000445440 1375 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 MARK2P15-201ENST00000432204 2186 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AL645937.1-201ENST00000641739 1652 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 OR1S2-201ENST00000302592 978 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 RNU6-1120P-201ENST00000362988 108 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 RNA5SP72-201ENST00000364442 117 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 RNY3P13-201ENST00000365542 102 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 BEND7P1-201ENST00000422058 457 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 COX6CP13-201ENST00000428703 226 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC009238.2-201ENST00000431026 355 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC091286.1-201ENST00000431233 461 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC079781.2-201ENST00000446424 169 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 RPL36AP41-201ENST00000493820 306 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC104383.1-201ENST00000530297 370 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 MIR548S-201ENST00000581352 82 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 HMGB2P1-201ENST00000591146 634 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC108738.1-201ENST00000603703 237 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC093838.1-201ENST00000613014 469 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC099654.14-201ENST00000638599 341 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 AC000374.1-201ENST00000434698 1745 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 MFSD8-242ENST00000641690 4199 ntBASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
CCDC85CA6NKD9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CCDC85CA6NKD9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CCDC85CA6NKD9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC85CA6NKD9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC85CA6NKD9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
CCDC85CA6NKD9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC85CA6NKD9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CCDC85CA6NKD9 RNU6-1155P-201ENST00000363554 107 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RNU6-1322P-201ENST00000364309 107 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 U3.11-201ENST00000364476 212 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 Y_RNA.409-201ENST00000383990 98 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RN7SKP284-201ENST00000411002 343 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RN7SKP247-201ENST00000411094 308 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 ELOCP14-201ENST00000428070 331 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 ELOCP7-201ENST00000439968 331 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AL450023.3-201ENST00000440592 271 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC022364.2-201ENST00000457963 554 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 UBE2DNL-203ENST00000474922 222 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RPS29P2-201ENST00000479278 136 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC092989.1-201ENST00000481235 277 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RN7SL441P-201ENST00000492388 296 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RPS24P16-201ENST00000497294 392 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RNU6-1220P-201ENST00000517126 108 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC011979.2-201ENST00000527568 352 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC105129.1-201ENST00000560250 297 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 NDUFB4P11-201ENST00000560510 395 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 SNORA74C-1-201ENST00000580726 201 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AL606490.9-201ENST00000603331 271 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AL136363.1-201ENST00000605349 337 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AL158211.4-201ENST00000606988 584 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC006338.1-201ENST00000618453 749 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 DUXAP9-208ENST00000622815 614 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 MAPK10-320ENST00000641462 6696 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 AC087190.4-201ENST00000574616 8334 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 LINC00622-201ENST00000562811 1570 ntBASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CCDC85CA6NKD9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC85CA6NKD9 OR5P1P-201ENST00000299512 925 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms