Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RSL24D1P6-201ENST00000426934 401 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 RPS17P8-201ENST00000434525 335 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 RPL21P89-201ENST00000444021 467 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL162388.1-201ENST00000450912 352 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 FGF7P6-202ENST00000451282 293 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC005008.1-201ENST00000456151 612 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL049714.1-201ENST00000466686 347 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC109927.2-201ENST00000506416 303 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC026801.2-201ENST00000515352 425 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL133271.1-201ENST00000538229 291 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL512310.1-201ENST00000548639 172 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC126177.3-201ENST00000551839 688 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL133153.1-201ENST00000557756 303 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AP001429.1-201ENST00000602568 530 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL606834.2-201ENST00000602954 668 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC012669.1-201ENST00000603209 283 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC091979.2-201ENST00000607514 214 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AF250324.2-201ENST00000608299 610 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL391813.2-201ENST00000609113 322 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AL022401.1-201ENST00000619498 108 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC067931.1-201ENST00000624190 671 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC091905.1-201ENST00000624400 311 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC019226.1-201ENST00000625666 515 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC004925.1-201ENST00000624256 2706 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC125257.1-201ENST00000560400 2930 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 AC105074.1-201ENST00000623380 3095 ntBASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA3Q9Y5H0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
PCDHGA3Q9Y5H0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 ELF2P3-201ENST00000445099 1506 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC116667.1-201ENST00000604855 2072 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 OR1S2-201ENST00000302592 978 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU1-83P-201ENST00000363426 164 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 RNA5SP447-201ENST00000363749 119 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-108P-201ENST00000365558 107 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 U3.22-201ENST00000391120 215 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AL590002.1-201ENST00000406554 418 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 BTF3P7-201ENST00000407097 488 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AL160275.2-201ENST00000412010 394 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 EI24P1-201ENST00000416584 867 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC092832.1-201ENST00000422934 400 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 OR4K11P-201ENST00000431829 904 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 RPS26P2-201ENST00000440331 348 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC140076.1-201ENST00000449897 361 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC135721.1-201ENST00000497954 479 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC091868.1-201ENST00000508746 304 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC010342.1-201ENST00000514047 877 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 DEFB108D-201ENST00000527787 222 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 RPL21P12-201ENST00000559810 515 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC007363.1-201ENST00000604736 620 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AL590392.1-201ENST00000604960 446 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AC017083.3-201ENST00000609955 700 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 LRRC77P-213ENST00000637727 880 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 A2MP1-204ENST00000566278 4130 ntBASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA3Q9Y5H0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA3Q9Y5H0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms