Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC008725.1-201ENST00000605123 2263 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP307-201ENST00000362863 116 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-1090P-201ENST00000364065 94 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-289P-201ENST00000364093 107 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-780P-201ENST00000391030 104 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 MIR1305-201ENST00000408300 86 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 SNORA11-201ENST00000408789 128 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP317-201ENST00000410176 116 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RN7SKP266-201ENST00000410232 287 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RN7SKP235-201ENST00000410662 305 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP311-201ENST00000411290 116 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC009237.10-201ENST00000414112 510 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 SPA17P1-201ENST00000416656 452 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 NANOGP6-201ENST00000429190 847 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 MTND4LP16-201ENST00000440828 295 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 TPT1P14-201ENST00000448018 505 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 FABP3P2-201ENST00000453169 399 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC010301.1-201ENST00000473936 355 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 KCTD9P5-201ENST00000504141 1170 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 HMGB1P29-201ENST00000505659 499 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC022447.3-201ENST00000506865 495 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 STMN1P2-201ENST00000508435 439 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL592156.1-201ENST00000508758 304 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC105914.1-201ENST00000511798 226 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 SAP18P1-201ENST00000512058 390 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC024589.1-201ENST00000512207 263 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC010493.1-201ENST00000513479 292 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP315-201ENST00000516340 116 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP312-201ENST00000517068 116 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 OR5AP1P-201ENST00000529730 940 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 CENPUP2-201ENST00000555897 1186 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 TPMTP1-201ENST00000592307 737 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL049634.3-201ENST00000604968 457 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC008277.2-201ENST00000605196 797 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL365503.1-201ENST00000605247 905 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 SNORD91B-202ENST00000608459 222 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 TUG1_1.1-201ENST00000610654 145 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 FAM27D1-201ENST00000612308 341 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 PISRT1-201ENST00000626175 531 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AL022578.1-201ENST00000439330 1433 ntBASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AC117529.2-201ENST00000512159 2068 ntBASIC4.96□□□□□ -1.61
CTDP1Q9Y5B0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CTDP1Q9Y5B0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CTDP1Q9Y5B0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 Y_RNA.61-201ENST00000362835 102 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 RNU1-44P-201ENST00000384453 163 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 RNU1-13P-201ENST00000384499 162 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 MT-TL1-201ENST00000386347 75 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AL160275.2-201ENST00000412010 394 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 OR51A5P-201ENST00000415429 942 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AL157831.1-201ENST00000426134 473 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 COX6CP15-201ENST00000426313 211 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 FCF1P1-201ENST00000432690 571 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 OR4C10P-201ENST00000434991 931 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 ARPC3P1-201ENST00000437218 533 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 RPL23AP46-201ENST00000438548 490 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 USP9YP8-201ENST00000441913 500 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 BTF3P5-201ENST00000457252 467 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 MTCO1P42-201ENST00000457379 726 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 RPS20P21-201ENST00000466859 343 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 RNA5SP446-201ENST00000515955 82 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AP003467.2-201ENST00000520175 319 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 FAM92A1P1-201ENST00000528023 890 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 OR4A12P-201ENST00000530847 918 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AK6P1-201ENST00000540219 478 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 OR8R1P-201ENST00000543943 764 ntBASIC4.96□□□□□ -1.62
CTDP1Q9Y5B0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms