Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 Y_RNA.390-201ENST00000383932 102 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 Y_RNA.450-201ENST00000384198 113 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 RNU1-44P-201ENST00000384453 163 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 SNORA37-201ENST00000384504 129 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 SNORD115-47-201ENST00000391226 86 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 EIF5P1-201ENST00000400019 1231 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 DHFRP6-201ENST00000401776 268 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 GSTA9P-201ENST00000406231 611 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 SNORA11.2-201ENST00000408318 127 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 MIR1277-201ENST00000408536 78 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 RPS27AP12-201ENST00000429552 465 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 RPS3AP54-201ENST00000435535 734 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AL512326.1-201ENST00000443050 721 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 BTF3P5-201ENST00000457252 467 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 MTCO1P42-201ENST00000457379 726 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 SNORA84-201ENST00000459229 133 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC010618.1-201ENST00000469924 477 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC109327.1-201ENST00000471666 403 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC034159.1-201ENST00000513885 583 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 TRAV8-5-201ENST00000537369 341 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 LARP7P2-201ENST00000575306 125 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 MIR4429-201ENST00000580105 73 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 MAGOH2P-202ENST00000584384 429 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 MIR3138-201ENST00000585238 82 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 NRBF2P1-201ENST00000587407 859 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC245389.1-201ENST00000605141 529 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC091965.4-201ENST00000607691 587 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC092954.2-201ENST00000609103 430 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AL445264.1-201ENST00000621719 171 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AC099654.14-201ENST00000638599 341 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 FAM157B-203ENST00000639350 358 ntBASIC4.39□□□□□ -1.71
DKK3Q9UBP4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DKK3Q9UBP4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AL022578.1-201ENST00000439330 1433 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 NOL8P1-201ENST00000508336 3529 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 Y_RNA.296-201ENST00000364930 108 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 Y_RNA.372-201ENST00000365599 102 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 RPS20P14-201ENST00000412545 360 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 USP9YP6-201ENST00000413550 854 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 MTCYBP24-201ENST00000420387 1106 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AL159169.1-201ENST00000421119 127 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 MTCO2P19-201ENST00000427513 598 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 RPL36P19-201ENST00000430744 301 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 MTND4LP10-201ENST00000435146 291 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 RPL23AP52-201ENST00000439311 478 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC112653.1-201ENST00000443851 386 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 Z99127.3-201ENST00000448158 395 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 USP9YP34-201ENST00000453983 808 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 RPS20P32-201ENST00000456044 356 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 RPL21P103-201ENST00000479921 488 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 RPL35P6-201ENST00000490024 372 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC091167.1-201ENST00000492017 396 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 FAM92A1P2-202ENST00000504766 877 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 HMGB1P29-201ENST00000505659 499 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 ARL2BPP6-201ENST00000512757 439 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC074344.1-201ENST00000512823 224 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 OR5BC1P-201ENST00000529327 739 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms