Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU5E-5P-201ENST00000365379 116 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RNU6-533P-201ENST00000384144 107 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RNY3P10-201ENST00000384764 102 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 MIR135A2-201ENST00000384854 100 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RNU6-628P-201ENST00000410675 107 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RN7SKP142-201ENST00000411236 328 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 SSXP9-201ENST00000417503 292 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RPL21P66-201ENST00000426566 466 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL117339.2-201ENST00000430475 180 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC098824.1-201ENST00000453565 980 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AP1S2P1-201ENST00000457344 379 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL132838.2-201ENST00000492041 314 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC093278.1-201ENST00000494700 600 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL139099.1-201ENST00000497398 403 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC005921.1-201ENST00000510589 286 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC108064.1-201ENST00000513791 460 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RNU2-58P-201ENST00000516403 183 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 SETP2-201ENST00000553886 926 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 BNIP3P5-201ENST00000562290 498 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC025627.2-201ENST00000576220 160 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AP005136.1-201ENST00000579765 429 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC012417.1-201ENST00000582307 1039 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 MIR432-201ENST00000606207 94 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AL158211.4-201ENST00000606988 584 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 AC112200.1-201ENST00000625015 234 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 MTND4P4-201ENST00000439033 1366 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 NOL8P1-201ENST00000508336 3529 ntBASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 SNORA60-201ENST00000362396 134 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 RNY4P24-201ENST00000362735 96 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 Y_RNA.77-201ENST00000362962 107 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 RNA5SP515-201ENST00000364570 118 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 RNA5SP283-201ENST00000365604 119 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 CCNG1P1-201ENST00000406783 885 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 MIR1193-201ENST00000408109 78 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 RN7SKP263-201ENST00000411194 309 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 CCDC58P2-201ENST00000417131 366 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 OR1AA1P-201ENST00000419597 916 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AL358472.1-201ENST00000431295 329 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AL121871.1-201ENST00000443413 436 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 HSFY6P-201ENST00000445573 403 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC010655.1-201ENST00000449336 292 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AL590365.1-201ENST00000450788 243 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 TMED11P-201ENST00000479478 690 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC096751.1-202ENST00000502691 1067 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 HMGB1P22-201ENST00000505315 124 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 KLHL2P1-201ENST00000508691 521 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC023141.12-201ENST00000512399 199 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 RNU7-143P-201ENST00000516781 65 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC015726.1-201ENST00000602353 681 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AP001981.2-201ENST00000603241 418 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AL590282.1-201ENST00000610379 1136 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC015967.1-201ENST00000619893 476 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 RNA5SP196-201ENST00000625967 102 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 ZNF962P-201ENST00000443465 3140 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 AC093908.1-201ENST00000623125 8092 ntBASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN3Q9P1Z3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms