Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC245054.1-201ENST00000420944 258 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 MTND1P20-201ENST00000430341 950 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 KCTD10P1-201ENST00000434203 625 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AL117351.1-201ENST00000438864 766 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RPL23AP16-201ENST00000441715 421 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 NUTF2P3-201ENST00000448540 384 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RPL26P28-201ENST00000451325 435 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC104073.1-201ENST00000451988 151 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC097262.1-201ENST00000452559 548 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 UBDP1-202ENST00000457888 382 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC091153.1-201ENST00000466297 402 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RN7SL283P-201ENST00000489055 303 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RN7SL323P-201ENST00000494712 295 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC105313.1-201ENST00000509121 353 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RN7SKP277-201ENST00000516895 283 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 SCARNA14-201ENST00000516903 136 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 PTP4A1P6-201ENST00000531034 478 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 LSM6P2-201ENST00000552208 177 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 MIR3915-201ENST00000578518 97 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AP005136.1-201ENST00000579765 429 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 MAGOH2P-202ENST00000584384 429 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AL022161.1-201ENST00000604390 213 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC080013.6-201ENST00000606185 215 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC068722.2-201ENST00000618734 544 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC112484.5-201ENST00000624189 228 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC231657.1-201ENST00000624313 397 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AC079228.1-201ENST00000624774 1049 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 MIR6830-201ENST00000636015 70 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 AP003399.1-201ENST00000637534 361 ntBASIC3.34□□□□□ -1.87
NDE1Q9NXR1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NDE1Q9NXR1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
NDE1Q9NXR1 AP004289.2-201ENST00000444413 1457 ntBASIC3.34□□□□□ -1.88
NDE1Q9NXR1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
NDE1Q9NXR1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 RNU6-374P-201ENST00000364146 108 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 U3.22-201ENST00000391120 215 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 ARF4P3-201ENST00000397387 509 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AL121972.1-201ENST00000402023 252 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 SSXP10-201ENST00000402595 565 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 MIR1193-201ENST00000408109 78 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 MTCYBP38-201ENST00000417160 1123 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 RSL24D1P6-201ENST00000426934 401 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AL035410.1-201ENST00000427409 427 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 MTND2P4-201ENST00000445034 1004 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 BX276092.4-201ENST00000452056 248 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC091564.1-201ENST00000464563 479 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC072039.1-201ENST00000477611 581 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 MTCO3P28-201ENST00000513351 515 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 RNU6-150P-201ENST00000516237 95 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 RANP9-201ENST00000519957 271 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 MRPL49P2-201ENST00000521066 465 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 DEFB131D-201ENST00000526803 184 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 ZNF705CP-201ENST00000530515 889 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 OR7K1P-201ENST00000546439 926 ntBASIC3.33□□□□□ -1.88
NDE1Q9NXR1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NDE1Q9NXR1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms