Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HPS4Q9NQG7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC068647.1-201ENST00000489539 2265 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 RNU6-821P-201ENST00000390995 107 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 ARF4P3-201ENST00000397387 509 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 SNORA11.2-201ENST00000408318 127 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 VN1R51P-201ENST00000411675 945 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 GLRXP1-201ENST00000423261 334 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 USP9YP22-201ENST00000438971 294 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL358794.1-201ENST00000445689 381 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC097262.1-201ENST00000452559 548 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC010401.1-201ENST00000463867 348 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 FCF1P3-201ENST00000496394 590 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC110794.1-201ENST00000505816 425 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC087808.1-201ENST00000520501 361 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AP001636.2-201ENST00000525517 696 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 OR4T1P-201ENST00000554933 911 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC103881.1-201ENST00000603476 538 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL162713.1-201ENST00000604480 262 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL139022.2-201ENST00000606934 443 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC006329.2-201ENST00000611491 394 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL450489.1-201ENST00000612071 468 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC009464.1-201ENST00000615731 469 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC231759.1-201ENST00000616455 597 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AL158163.2-201ENST00000619110 700 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 OR1S1-201ENST00000624470 978 ntBASIC3.45□□□□□ -1.86
HPS4Q9NQG7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.45□□□□□ -1.86
HPS4Q9NQG7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 SRP72P2-201ENST00000344851 1979 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 RNA5SP235-201ENST00000365411 114 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 Z99755.1-201ENST00000414048 380 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 Z75741.2-201ENST00000417272 1167 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC007435.1-201ENST00000421086 415 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 RPS20P24-201ENST00000457473 361 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 snoU109.3-201ENST00000459477 145 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AP001992.1-205ENST00000462248 379 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC112198.1-201ENST00000505369 1220 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 MTATP6P9-201ENST00000515039 680 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC021451.1-201ENST00000523498 1129 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC069545.1-201ENST00000605671 358 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 AC135507.2-201ENST00000612443 309 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HPS4Q9NQG7 NUP58P1-201ENST00000502546 1738 ntBASIC3.44□□□□□ -1.86
HPS4Q9NQG7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HPS4Q9NQG7 FAM35CP-201ENST00000554755 2470 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 RPL23AP57-201ENST00000332361 466 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 RNU1-75P-201ENST00000347264 129 ntBASIC3.43□□□□□ -1.86
HPS4Q9NQG7 RNU6-50P-201ENST00000362356 103 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms