Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 DEFB109D-201ENST00000529497 240 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 ZNF705CP-201ENST00000530515 889 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 ACTR3BP3-201ENST00000565577 979 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC009101.1-201ENST00000568135 242 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC034105.4-201ENST00000568304 277 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AP001981.2-201ENST00000603241 418 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 U1.23-201ENST00000610293 146 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC073114.1-201ENST00000612027 490 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 RNU1-68P-201ENST00000615382 146 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC068722.2-201ENST00000618734 544 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 SNORD39.4-201ENST00000620099 78 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AL356321.1-201ENST00000621360 228 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 U1.39-201ENST00000621562 146 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC008443.7-201ENST00000622195 246 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC079228.1-201ENST00000624774 1049 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 ZNF833P-201ENST00000424938 1494 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AC090971.4-201ENST00000560291 1800 ntBASIC3.58□□□□□ -1.84
SIX2Q9NPC8 AP001486.2-201ENST00000561652 5113 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 Y_RNA.51-201ENST00000362725 102 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MIR218-2-201ENST00000385006 110 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MT-TH-201ENST00000387441 69 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 DDX18P3-201ENST00000404856 2007 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 BTF3L4P1-201ENST00000413813 468 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 Z99497.1-201ENST00000421282 135 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 RPL30P3-201ENST00000424262 333 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 BX890604.2-201ENST00000427883 474 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 BMS1P19-201ENST00000433925 393 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MTCO2P16-201ENST00000436962 677 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 ARPC3P2-201ENST00000457786 533 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 FAM133DP-201ENST00000464802 691 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC109486.1-201ENST00000486833 374 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC091435.1-201ENST00000505442 584 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MTCYBP43-201ENST00000513621 740 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC239860.2-201ENST00000525886 270 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC004024.1-201ENST00000549244 247 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 RPL21P12-201ENST00000559810 515 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 MIR4512-201ENST00000583257 77 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC092140.2-201ENST00000618027 521 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AC231657.1-201ENST00000624313 397 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 OR4G11P-202ENST00000642116 1414 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
SIX2Q9NPC8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.57□□□□□ -1.84
SIX2Q9NPC8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 SAGE4P-201ENST00000442271 3381 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 DDX43P2-201ENST00000604753 1354 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AL672167.1-206ENST00000356293 943 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RNU6-433P-201ENST00000363216 104 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RNU6-1243P-201ENST00000364028 107 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RNU6-374P-201ENST00000364146 108 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RNU4-24P-201ENST00000364565 139 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RNU6-660P-201ENST00000364566 109 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RNA5SP88-201ENST00000365560 109 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 Y_RNA.436-201ENST00000384097 102 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 SNORA26.8-201ENST00000391306 124 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms