Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC006927.3-201ENST00000638789 384 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 AC119674.1-207ENST00000641355 633 ntBASIC4.05□□□□□ -1.76
CDT1Q9H211 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDT1Q9H211 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDT1Q9H211 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CDT1Q9H211 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 MTND4P16-201ENST00000466108 1367 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 RPL17P50-201ENST00000396131 546 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AL024474.1-201ENST00000404655 591 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.04□□□□□ -1.76
CDT1Q9H211 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.04□□□□□ -1.76
CDT1Q9H211 AC083875.1-201ENST00000419509 405 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC008065.1-201ENST00000428525 348 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 NANOGP6-201ENST00000429190 847 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.04□□□□□ -1.76
CDT1Q9H211 COX6CP2-201ENST00000444980 225 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC098824.1-201ENST00000453565 980 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC069499.1-201ENST00000489433 509 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 RNF138P1-201ENST00000502765 546 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.04□□□□□ -1.76
CDT1Q9H211 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.04□□□□□ -1.76
CDT1Q9H211 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.04□□□□□ -1.76
CDT1Q9H211 AC026403.1-201ENST00000518938 295 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.04□□□□□ -1.76
CDT1Q9H211 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.04□□□□□ -1.76
CDT1Q9H211 OR4A45P-201ENST00000529954 901 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC008011.1-201ENST00000545989 227 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.04□□□□□ -1.76
CDT1Q9H211 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.04□□□□□ -1.76
CDT1Q9H211 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 MIR4444-1-201ENST00000581696 74 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.04□□□□□ -1.76
CDT1Q9H211 MIR4444-2-201ENST00000584390 74 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC087683.1-201ENST00000591187 441 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC079089.3-201ENST00000603094 673 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 AP003117.2-201ENST00000606010 545 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC068944.2-201ENST00000610373 403 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AC116165.2-201ENST00000616705 206 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 AL359715.5-201ENST00000623431 443 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.04□□□□□ -1.76
CDT1Q9H211 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.04□□□□□ -1.76
CDT1Q9H211 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 SAGE4P-201ENST00000442271 3381 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 CR383658.2-201ENST00000547576 1525 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDT1Q9H211 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.04□□□□□ -1.76
CDT1Q9H211 MFSD8-236ENST00000641509 4050 ntBASIC4.04□□□□□ -1.76
CDT1Q9H211 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.04□□□□□ -1.76
CDT1Q9H211 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 HMGB1P17-201ENST00000403495 628 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 RPL23AP48-201ENST00000406913 488 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 RN7SKP177-201ENST00000410567 355 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 RNU2-16P-201ENST00000410712 136 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.03□□□□□ -1.76
CDT1Q9H211 RPL31P45-201ENST00000419532 356 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AL035410.1-201ENST00000427409 427 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC104651.1-201ENST00000427559 735 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC006946.1-201ENST00000429106 328 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 C8orf59P1-201ENST00000429930 303 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 AL512286.1-201ENST00000439244 400 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.03□□□□□ -1.76
CDT1Q9H211 ST13P20-201ENST00000447996 1065 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.03□□□□□ -1.76
CDT1Q9H211 BX276092.4-201ENST00000452056 248 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 MTCYBP1-201ENST00000454315 1119 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC133473.1-201ENST00000455173 299 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 SNRPGP9-201ENST00000456025 225 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 RPL7P15-201ENST00000461190 712 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC010469.1-201ENST00000463864 576 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC091564.1-201ENST00000464563 479 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 PLGLA-201ENST00000465668 449 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 PABPC1P3-201ENST00000469174 459 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC096751.1-202ENST00000502691 1067 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms