Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 HSPE1P28-201ENST00000443139 211 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 RPL30P14-201ENST00000482744 348 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 TXNP6-201ENST00000510190 310 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 RNA5SP217-201ENST00000515959 91 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC122134.1-202ENST00000569111 1201 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC106791.2-201ENST00000604680 391 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC091946.2-201ENST00000606105 291 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AL583856.2-201ENST00000606298 543 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC004832.5-201ENST00000608677 401 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 MIR7112-201ENST00000616126 65 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC138932.5-201ENST00000617759 563 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC006249.1-201ENST00000621223 471 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AL353748.2-201ENST00000622148 471 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC109454.4-201ENST00000623411 649 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC004777.1-201ENST00000624317 287 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AC090740.1-201ENST00000623193 2262 ntBASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
POLR1EQ9GZS1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AP002907.1-201ENST00000606361 1430 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AL603865.2-201ENST00000401679 213 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 RNA5SP38-201ENST00000410750 119 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC069282.1-201ENST00000411911 526 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 RPS7P13-201ENST00000413955 498 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 RPL32P35-201ENST00000415214 394 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AL353678.1-201ENST00000422735 741 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 USP9YP36-201ENST00000424581 829 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AL353705.1-201ENST00000433468 480 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC093392.2-201ENST00000450682 337 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC244505.3-201ENST00000454598 187 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 RN7SL863P-201ENST00000462370 296 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC093278.1-201ENST00000494700 600 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC026414.1-201ENST00000504046 698 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC016550.1-201ENST00000505348 785 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC010460.2-201ENST00000509054 677 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC090079.2-201ENST00000575289 768 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AL031985.2-201ENST00000600955 480 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AL022099.1-201ENST00000604551 712 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 AP000720.1-201ENST00000625091 483 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 Z99496.1-201ENST00000469424 1477 ntBASIC3.22□□□□□ -1.89
POLR1EQ9GZS1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.89
POLR1EQ9GZS1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 SNORD56.3-201ENST00000363507 71 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 U3.11-201ENST00000364476 212 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 SUGT1P1-201ENST00000379514 476 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 MIR493-201ENST00000385254 89 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 RPS4XP3-201ENST00000398541 413 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 U3.42-201ENST00000408746 214 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AL024507.1-201ENST00000412741 274 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC006960.1-201ENST00000419980 153 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 PSMA6P3-201ENST00000428242 164 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AL121871.1-201ENST00000443413 436 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 Z82190.1-201ENST00000454534 490 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AL049829.1-201ENST00000465411 156 ntBASIC3.21□□□□□ -1.9
POLR1EQ9GZS1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms