Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 RPL7P5-201ENST00000471472 736 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC006499.5-201ENST00000505037 514 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AL512347.1-201ENST00000566420 503 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 GLUD1P4-201ENST00000590914 418 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC099778.2-201ENST00000610904 211 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC091905.1-201ENST00000624400 311 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 ATP5F1P3-201ENST00000397213 657 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AL355143.1-201ENST00000407101 841 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 SNORA11-201ENST00000408789 128 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AC245054.1-201ENST00000420944 258 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 EEF1A1P39-201ENST00000440791 250 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 RNU6-420P-201ENST00000458780 107 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 SNORD121B-201ENST00000458838 81 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 MTND1P16-201ENST00000465177 898 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AC106707.2-201ENST00000484182 374 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AC010342.1-201ENST00000514047 877 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 RNU6-579P-201ENST00000516879 102 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 HMGN1P28-201ENST00000521340 364 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AC011602.1-201ENST00000546484 331 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 TMF1P1-201ENST00000576058 373 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 OR4K8P-201ENST00000578842 1048 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 MIR1254-2-201ENST00000579553 63 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 AL590099.1-201ENST00000615276 138 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 FAM35CP-201ENST00000554755 2470 ntBASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP4AQ9BY43 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.71□□□□□ -1.65
CHMP4AQ9BY43 AP003122.5-201ENST00000527668 3766 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 MIR620-201ENST00000385232 95 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 ATG3P1-201ENST00000419507 911 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 CYCSP4-201ENST00000429682 331 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 RNU7-136P-201ENST00000458819 69 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 HSPE1P6-201ENST00000479457 291 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 WBP1LP4-201ENST00000505043 344 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 UBE2NP1-201ENST00000545592 458 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 MIR4444-1-201ENST00000581696 74 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 MIR4444-2-201ENST00000584390 74 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 BBIP1P1-201ENST00000602999 279 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AC010591.1-201ENST00000603941 649 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AC069431.2-201ENST00000604149 1099 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AC005014.3-201ENST00000605985 190 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AC079684.1-201ENST00000621405 437 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AP003355.3-201ENST00000623465 114 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AL034408.1-202ENST00000636088 415 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 AL732372.2-225ENST00000642124 456 ntBASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP4AQ9BY43 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 MOB1AP1-201ENST00000430903 535 ntBASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 FCF1P6-201ENST00000456841 595 ntBASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 AC023598.1-201ENST00000472521 361 ntBASIC4.7□□□□□ -1.66
CHMP4AQ9BY43 MTCYBP17-201ENST00000503579 789 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms