Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL157700.1-201ENST00000561973 1432 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AL359893.1-201ENST00000447628 1580 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 FAM35CP-201ENST00000554755 2470 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 RNU6-859P-201ENST00000362728 107 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 U3.12-201ENST00000364498 214 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC002542.1-201ENST00000440683 193 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 MOB1AP2-201ENST00000446060 614 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC092754.2-201ENST00000463506 460 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC003982.1-202ENST00000469928 248 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC078918.1-201ENST00000498515 228 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC005921.1-201ENST00000510589 286 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AP004242.1-201ENST00000533701 349 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 MAGOH2P-202ENST00000584384 429 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AL020997.3-201ENST00000602843 359 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC011468.4-201ENST00000603942 409 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC018754.1-201ENST00000607486 925 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC016542.1-201ENST00000608259 493 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AP004247.3-201ENST00000608682 624 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC231759.1-201ENST00000616455 597 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC009039.2-201ENST00000624524 529 ntBASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.4□□□□□ -1.86
RPAP1Q9BWH6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPAP1Q9BWH6 MIR512-1-201ENST00000384913 84 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AL031679.1-201ENST00000400616 525 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 MIR1250-201ENST00000408098 113 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 UBE2V1P9-201ENST00000414760 368 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 RPS3AP9-201ENST00000417027 792 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 GXYLT1P1-201ENST00000446657 490 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 SNORD109B-201ENST00000458961 67 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 SNORD109A-201ENST00000459128 67 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 RPL32P14-201ENST00000463196 378 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC008379.1-201ENST00000463655 464 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 RPL9P33-201ENST00000484311 566 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 RNF138P1-201ENST00000502765 546 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 RN7SKP282-201ENST00000516824 299 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 SNORA31.26-201ENST00000517250 137 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 IGKV2D-36-201ENST00000518643 226 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 HMGB1P1-201ENST00000522557 636 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC090616.5-202ENST00000582111 297 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC078899.3-201ENST00000599065 212 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC133794.1-201ENST00000602731 914 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 AC108206.1-201ENST00000570186 4159 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 ZNF849P-201ENST00000594711 1566 ntBASIC3.39□□□□□ -1.87
RPAP1Q9BWH6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RNU6-444P-201ENST00000383988 108 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RNU6-1226P-201ENST00000384317 107 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 MIR34A-201ENST00000385130 110 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 HSPE1P26-201ENST00000405341 275 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RNA5SP21-201ENST00000410917 96 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 DEFB130D-201ENST00000426866 237 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 UBE2D3P3-201ENST00000426992 425 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RPS20P5-201ENST00000434808 360 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL121890.1-201ENST00000435457 205 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL513043.1-201ENST00000439124 535 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 CDC42P1-201ENST00000456658 548 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AP001025.2-201ENST00000490908 477 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC104057.1-201ENST00000515547 497 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL512310.1-201ENST00000548639 172 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AC005156.1-201ENST00000613371 573 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 SNORA31-201ENST00000362607 130 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RNU6-441P-201ENST00000384545 106 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 MIR1261-201ENST00000408659 82 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
RPAP1Q9BWH6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms