Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC008280.2-201ENST00000455473 307 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 RPL30P14-201ENST00000482744 348 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC025768.1-201ENST00000510057 267 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 MTCO1P47-201ENST00000523889 1271 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC139103.1-201ENST00000534696 1030 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC018630.1-201ENST00000541376 925 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AL442163.2-201ENST00000553912 710 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 MIMT1-201ENST00000597105 1050 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 VN1R78P-201ENST00000597393 564 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC128687.1-201ENST00000605304 619 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC096577.2-201ENST00000611455 153 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC034102.8-201ENST00000615146 484 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC007342.9-201ENST00000623877 1385 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 RNU6-263P-201ENST00000363811 107 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 RNU6-374P-201ENST00000364146 108 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 RNU6-339P-201ENST00000384310 107 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 FAT1P1-201ENST00000406588 507 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AL353692.2-201ENST00000407054 335 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 RPL35AP12-201ENST00000425362 338 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 RPS24P13-201ENST00000442520 397 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 RPS3AP12-201ENST00000443616 753 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC011753.1-201ENST00000451001 220 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 MRPL35P4-201ENST00000453682 566 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 BX510359.1-201ENST00000456973 237 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 RPS4XP6-201ENST00000477670 797 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 OR5H5P-201ENST00000503164 928 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 SNORA31.21-201ENST00000517180 77 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC022616.2-201ENST00000523185 300 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC092470.1-201ENST00000546187 132 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC090312.2-201ENST00000582687 378 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 MIR4658-201ENST00000584344 65 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC024220.1-201ENST00000603675 484 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC007179.3-201ENST00000604976 235 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 YPEL5P2-201ENST00000605553 359 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC011374.2-201ENST00000607135 526 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 MIR8057-201ENST00000620957 69 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC004777.1-201ENST00000624317 287 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC011460.1-201ENST00000636268 1834 ntBASIC1.61□□□□□ -2.15
LIMD2Q9BT23 AC010680.1-201ENST00000590024 3590 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 RNU1-100P-201ENST00000365255 165 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 OR52E6-202ENST00000379946 954 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 Y_RNA.493-201ENST00000384422 102 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 RNU6-1072P-201ENST00000384703 107 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 RNU6-443P-201ENST00000384780 107 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 MIR181A2-201ENST00000384863 110 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 RNU4-78P-201ENST00000410940 126 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.6□□□□□ -2.15
LIMD2Q9BT23 AC099677.1-201ENST00000420575 175 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 RPL7P30-201ENST00000420888 709 ntBASIC1.6□□□□□ -2.15
LIMD2Q9BT23 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms