Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 RN7SKP202-201ENST00000410439 330 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 RNA5SP38-201ENST00000410750 119 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX3Q99909 MTCO2P21-201ENST00000419780 677 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 MTND1P32-201ENST00000433043 938 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX3Q99909 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.23□□□□□ -1.89
SSX3Q99909 RPS11P1-201ENST00000451072 473 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AL353691.1-201ENST00000451332 387 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 VN1R40P-201ENST00000455196 941 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX3Q99909 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 RPL31P50-201ENST00000471002 296 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 RPS4XP15-201ENST00000489210 795 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 AC105185.1-201ENST00000518705 535 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSX3Q99909 TRAV37-201ENST00000553906 342 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.23□□□□□ -1.89
SSX3Q99909 AP005205.1-201ENST00000563503 508 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AC009097.3-201ENST00000563557 1018 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX3Q99909 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX3Q99909 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.23□□□□□ -1.89
SSX3Q99909 DUXAP11-201ENST00000603858 526 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AC106791.2-201ENST00000604680 391 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AC004853.1-201ENST00000604902 698 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AL365503.1-201ENST00000605247 905 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AC013244.3-201ENST00000605614 388 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AL596245.1-201ENST00000618994 362 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SSX3Q99909 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 AC079228.1-201ENST00000624774 1049 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX3Q99909 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SSX3Q99909 DDX43P2-201ENST00000604753 1354 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSX3Q99909 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX3Q99909 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX3Q99909 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 MIR134-201ENST00000385258 73 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 RNU6-882P-201ENST00000391025 103 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.22□□□□□ -1.89
SSX3Q99909 XKRYP1-201ENST00000423438 492 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 USP9YP36-201ENST00000424581 829 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 XKRYP2-201ENST00000432915 492 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.22□□□□□ -1.89
SSX3Q99909 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX3Q99909 TBCAP1-201ENST00000436520 327 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 SNRPEP7-201ENST00000438350 220 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AL591719.1-201ENST00000444669 744 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AC002381.1-201ENST00000447049 280 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 RSL24D1P3-201ENST00000449255 495 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
SSX3Q99909 RPS3AP6-201ENST00000484430 795 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX3Q99909 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX3Q99909 RNA5SP179-201ENST00000517284 121 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 FAM60DP-201ENST00000524174 632 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.22□□□□□ -1.89
SSX3Q99909 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.22□□□□□ -1.89
SSX3Q99909 OR6C7P-201ENST00000547875 934 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 OR4T1P-201ENST00000554933 911 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX3Q99909 AC037471.2-201ENST00000564941 598 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AC005951.1-201ENST00000576706 485 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 OR4K8P-201ENST00000578842 1048 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 MIR1254-2-201ENST00000579553 63 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX3Q99909 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.22□□□□□ -1.89
SSX3Q99909 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX3Q99909 AL139089.1-201ENST00000620372 975 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX3Q99909 AL445264.1-201ENST00000621719 171 ntBASIC3.22□□□□□ -1.89
SSX3Q99909 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX3Q99909 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.22□□□□□ -1.89
SSX3Q99909 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX3Q99909 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX3Q99909 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX3Q99909 UBE3AP2-201ENST00000429033 2259 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms