Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MIR7155-201ENST00000615925 56 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC244258.1-201ENST00000637553 1071 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 AC008013.2-202ENST00000637965 364 ntBASIC3.79□□□□□ -1.8
NR1H4Q96RI1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NR1H4Q96RI1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 TAB3P1-202ENST00000452645 1634 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 RN7SKP103-201ENST00000363848 320 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 RNU6-637P-201ENST00000384050 107 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 MIR105-2-201ENST00000385083 81 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AL109941.1-201ENST00000401925 229 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC007390.1-201ENST00000415722 356 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 MTCO1P39-201ENST00000426148 480 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 RPL35AP22-201ENST00000436855 335 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 KATNBL1P3-201ENST00000443475 909 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 MTND2P4-201ENST00000445034 1004 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 RPS4XP13-201ENST00000483219 789 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 RPL23AP41-201ENST00000484754 458 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 RPL7P24-201ENST00000493052 752 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 NDUFA5P2-201ENST00000519723 344 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 BNIP3P5-201ENST00000562290 498 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 MIR4738-201ENST00000579134 87 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC012443.1-201ENST00000605605 231 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC211433.2-201ENST00000608433 387 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AL391497.1-201ENST00000608671 547 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AL355810.1-201ENST00000614629 552 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AC091905.1-201ENST00000624400 311 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 MIR4275-201ENST00000636486 87 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 AP001148.1-201ENST00000624124 2359 ntBASIC3.78□□□□□ -1.8
NR1H4Q96RI1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H4Q96RI1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RNU6-533P-201ENST00000384144 107 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RNA5SP129-201ENST00000410276 118 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RNU6-516P-201ENST00000411381 104 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 HMGN1P24-201ENST00000412282 298 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RPS15AP6-201ENST00000420703 385 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC233728.2-201ENST00000425348 757 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 COX6CP2-201ENST00000444980 225 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 GDI2P2-201ENST00000445131 608 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 COX6CP12-201ENST00000446748 202 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 EPS15P1-201ENST00000448836 336 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 SNRPFP4-201ENST00000456366 242 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RPL31P3-201ENST00000458430 332 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RPL12P20-201ENST00000475538 479 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RPS29P19-201ENST00000479709 171 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC112204.1-201ENST00000502591 103 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 PCBP2P3-201ENST00000509726 843 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms