Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC022483.1-201ENST00000514020 567 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC103783.1-201ENST00000520506 373 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 C1GALT1P3-201ENST00000522049 819 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 DEFB108D-201ENST00000527787 222 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC067852.3-201ENST00000589177 561 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AL590099.1-201ENST00000615276 138 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC099654.9-201ENST00000637055 678 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 AC011460.1-201ENST00000636268 1834 ntBASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NSMCE2Q96MF7 OR5BR1P-201ENST00000524992 1330 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 SNORD9-201ENST00000362566 104 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 RNU6-952P-201ENST00000391164 108 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 RN7SKP156-201ENST00000410308 342 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 CCDC58P2-201ENST00000417131 366 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 RPL26P6-201ENST00000440913 438 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 BX322784.1-201ENST00000455793 1077 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AC010374.2-201ENST00000512933 535 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AC026402.1-201ENST00000513642 170 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 SNORA70.18-201ENST00000516696 98 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 OR4K7P-201ENST00000580232 945 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AC105224.1-201ENST00000587055 421 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 DUXAP3-201ENST00000603616 594 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 MTND3P19-201ENST00000603825 345 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AL357080.1-201ENST00000617394 239 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AL445264.1-201ENST00000621719 171 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 MIR6730-201ENST00000622213 67 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AC119674.1-207ENST00000641355 633 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AL390862.1-201ENST00000635467 1469 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 MAPK10-322ENST00000641485 4530 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.19□□□□□ -1.9
NSMCE2Q96MF7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 RNU6-343P-201ENST00000364709 104 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 PPIAP31-201ENST00000405422 495 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 HSFY6P-201ENST00000445573 403 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AL031313.1-201ENST00000448435 256 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC093392.2-201ENST00000450682 337 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 ZNF886P-201ENST00000450781 723 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC234775.1-201ENST00000454247 670 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 MTND1P16-201ENST00000465177 898 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 RPL31P50-201ENST00000471002 296 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 RPL31P60-201ENST00000478450 367 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AL359273.1-201ENST00000510918 627 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC007991.1-201ENST00000522680 631 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 DEFB131D-201ENST00000526803 184 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 MIR3921-201ENST00000577308 85 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 MIR5186-201ENST00000577504 120 ntBASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
NSMCE2Q96MF7 AC091057.3-201ENST00000602684 733 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms