Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RPL29P29-201ENST00000448725 423 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 RAD23BP3-201ENST00000454157 1152 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX27Q96L92 RPS26P28-201ENST00000470806 348 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 RPL21P103-201ENST00000479921 488 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AC022447.3-201ENST00000506865 495 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX27Q96L92 IFITM8P-201ENST00000522529 394 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AP000873.5-201ENST00000533906 236 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
SNX27Q96L92 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.45□□□□□ -1.7
SNX27Q96L92 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX27Q96L92 AC012065.4-201ENST00000602445 679 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 AP000403.1-201ENST00000603349 851 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 OR6R2P-201ENST00000609216 300 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 AC009878.1-201ENST00000621819 340 ntBASIC4.45□□□□□ -1.7
SNX27Q96L92 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX27Q96L92 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX27Q96L92 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX27Q96L92 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX27Q96L92 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX27Q96L92 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX27Q96L92 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX27Q96L92 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX27Q96L92 MTND4P4-201ENST00000439033 1366 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SNX27Q96L92 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX27Q96L92 Y_RNA.97-201ENST00000363094 102 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 RNU6-623P-201ENST00000363143 105 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX27Q96L92 U8.14-201ENST00000390843 143 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 MIR1305-201ENST00000408300 86 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX27Q96L92 RNU2-15P-201ENST00000410692 191 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX27Q96L92 AC007742.1-201ENST00000425789 329 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX27Q96L92 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.44□□□□□ -1.7
SNX27Q96L92 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX27Q96L92 ELOCP26-201ENST00000436067 329 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AL353706.1-201ENST00000436728 494 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 MTCO1P19-201ENST00000443487 500 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX27Q96L92 AC115115.1-201ENST00000449927 248 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 PPIAP3-201ENST00000450588 505 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX27Q96L92 HMGB1P15-201ENST00000453854 435 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 OR6K1P-201ENST00000456766 971 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 RPS20P24-201ENST00000457473 361 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AP001992.1-205ENST00000462248 379 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AC104563.1-201ENST00000476147 376 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AC004924.1-201ENST00000480160 781 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AC132942.1-201ENST00000486753 483 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 HMGB1P36-201ENST00000487709 576 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX27Q96L92 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX27Q96L92 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX27Q96L92 FTH1P21-201ENST00000512179 511 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX27Q96L92 AC025881.1-201ENST00000518851 512 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AC083760.1-201ENST00000589621 670 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX27Q96L92 LLPHP1-201ENST00000603571 367 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AC025594.3-201ENST00000613068 790 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AC027807.2-201ENST00000616099 408 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 AL034408.1-202ENST00000636088 415 ntBASIC4.44□□□□□ -1.7
SNX27Q96L92 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX27Q96L92 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX27Q96L92 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX27Q96L92 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SNX27Q96L92 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 AC095050.2-201ENST00000510748 1458 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SNX27Q96L92 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX27Q96L92 Y_RNA.194-201ENST00000363985 102 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 Y_RNA.493-201ENST00000384422 102 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 UBE2V1P2-201ENST00000397758 440 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 AL079342.1-201ENST00000401460 267 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 AL355379.1-201ENST00000405542 640 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 MTCO1P17-201ENST00000411522 491 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 PGBD4P8-201ENST00000412993 562 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 RPL17P12-201ENST00000413391 526 ntBASIC4.43□□□□□ -1.7
SNX27Q96L92 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms