Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 VPS35P1-201ENST00000563400 1518 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 Y_RNA.89-201ENST00000363031 102 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 RNU6-534P-201ENST00000364877 106 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 Y_RNA.409-201ENST00000383990 98 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 MIR184-201ENST00000384962 84 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 MIR298-201ENST00000401212 88 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL590704.1-201ENST00000402856 794 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 Y_RNA.608-201ENST00000410647 95 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 USP9YP27-201ENST00000418455 438 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 USP9YP36-201ENST00000424581 829 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 MTCO1P20-201ENST00000425366 358 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 SNRPEP7-201ENST00000438350 220 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 OR6K1P-201ENST00000456766 971 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 RPL21P71-201ENST00000465598 459 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 RN7SL691P-201ENST00000494487 301 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 NIPA2P2-201ENST00000496376 1083 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AC112204.1-201ENST00000502591 103 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 HMGB1P29-201ENST00000505659 499 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AC010493.1-201ENST00000513479 292 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 MIR3682-201ENST00000581338 84 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL117336.2-201ENST00000602435 335 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL121757.2-201ENST00000611223 313 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 AL020991.1-201ENST00000612314 373 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 MIR6715B-201ENST00000637172 77 ntBASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
PDLIM2Q96JY6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 Y_RNA.160-201ENST00000363677 92 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RNU6-777P-201ENST00000364265 104 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RNVU1-6-201ENST00000364688 164 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RNU6-283P-201ENST00000364788 107 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 MIR1251-201ENST00000408552 70 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RNA5SP36-201ENST00000410197 133 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RNU2-50P-201ENST00000410494 143 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RNU6-195P-201ENST00000411352 109 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 SPA17P1-201ENST00000416656 452 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RWDD4P2-201ENST00000426392 563 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 ISCA1P6-201ENST00000427740 390 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RLIMP2-201ENST00000427891 1563 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AL359265.2-201ENST00000434367 631 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC009961.2-201ENST00000435771 251 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 ARPC3P1-201ENST00000437218 533 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 MRPS31P2-201ENST00000451581 518 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 MTCO1P42-201ENST00000457379 726 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RPS15AP1-201ENST00000457423 391 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RNA5SP246-201ENST00000458909 119 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 RPL38P1-201ENST00000460914 211 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC092757.1-201ENST00000467293 467 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 OR52A4P-201ENST00000472867 958 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 FAM172BP-201ENST00000487497 1089 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 KCTD9P5-201ENST00000504141 1170 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 ARL2BPP5-201ENST00000523141 481 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC008489.1-201ENST00000524271 483 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 MTND1P35-201ENST00000526739 508 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AL157687.1-201ENST00000554853 619 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC022655.2-201ENST00000577280 318 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 UBE2V2P2-201ENST00000587677 504 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC008782.1-201ENST00000603386 430 ntBASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDLIM2Q96JY6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms