Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 C1DP2-201ENST00000418167 426 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 RPS29P17-201ENST00000430795 166 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 HMGB1P15-201ENST00000453854 435 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC079804.1-201ENST00000461922 436 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 RN7SL98P-201ENST00000462271 300 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 MTND1P3-201ENST00000484956 952 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 RNU6-714P-201ENST00000516963 103 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 RNU6-430P-201ENST00000517078 107 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AP003467.2-201ENST00000520175 319 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 CBX3P5-201ENST00000552017 521 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC009101.1-201ENST00000568135 242 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 BPIFA4P-203ENST00000603168 689 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AL160290.3-201ENST00000604869 165 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AL009028.1-201ENST00000604895 802 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC007684.1-201ENST00000609671 477 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC083809.1-201ENST00000615051 472 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 SEPT14P19-203ENST00000633205 211 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC110994.2-201ENST00000635481 492 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 LINC00622-201ENST00000562811 1570 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS50Q96JG6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AL161781.1-201ENST00000354277 403 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 U8.3-201ENST00000363321 132 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 Y_RNA.234-201ENST00000364409 97 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RNA5SP167-201ENST00000365461 116 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS50Q96JG6 RNU5A-6P-201ENST00000384136 116 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 SNORD115.1-201ENST00000391109 76 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 U3.22-201ENST00000391120 215 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 U3.29-201ENST00000391296 212 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AL356421.1-201ENST00000403255 413 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RPL7P25-201ENST00000404151 721 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AL356967.1-201ENST00000406305 431 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RNA5SP306-201ENST00000411087 107 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 BX295541.1-201ENST00000417774 250 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AL589872.1-201ENST00000426602 288 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RPL22P17-201ENST00000438729 315 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RPL17P49-201ENST00000443728 411 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AP000873.1-201ENST00000463987 400 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC146507.1-201ENST00000468335 354 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RPL9P6-201ENST00000492764 598 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC105252.1-201ENST00000503089 286 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 OR5H5P-201ENST00000503164 928 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC006390.1-201ENST00000508068 283 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RNU2-46P-201ENST00000517038 113 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 MIR2116-201ENST00000517221 80 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 OR5BC1P-201ENST00000529327 739 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC023575.1-201ENST00000580510 358 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 Z98200.1-201ENST00000607298 470 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AL391813.2-201ENST00000609113 322 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 uc_338.13-201ENST00000618243 179 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC138649.3-201ENST00000622154 254 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC007546.2-201ENST00000623996 360 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 OR5H6-203ENST00000642105 978 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS50Q96JG6 CPHL1P-201ENST00000461341 3407 ntBASIC4.2□□□□□ -1.74
VPS50Q96JG6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS50Q96JG6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms