Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPL38P1-201ENST00000460914 211 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 ACTR3P3-201ENST00000480448 893 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 RPS27AP13-201ENST00000498403 237 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP154-201ENST00000516193 111 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-1003P-201ENST00000517099 105 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AP003730.1-201ENST00000524605 285 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AP003385.6-201ENST00000531603 374 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC012417.1-201ENST00000582307 1039 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AL669831.4-202ENST00000590817 238 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC138749.5-201ENST00000611461 208 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC116165.2-201ENST00000616705 206 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AL445567.2-201ENST00000618935 498 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC091925.2-201ENST00000625059 256 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC027514.1-201ENST00000588561 1603 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 SNORA60-201ENST00000362396 134 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 Y_RNA.41-201ENST00000362646 102 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP258-201ENST00000362750 119 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 MIR513A2-201ENST00000385249 127 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-248P-201ENST00000410720 107 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 RNU4-78P-201ENST00000410940 126 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 RPS3AP3-201ENST00000411933 242 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC244098.2-201ENST00000422068 99 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC009220.1-201ENST00000451614 275 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 COX7A2P2-201ENST00000505291 250 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP309-201ENST00000516670 106 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 RNU7-143P-201ENST00000516781 65 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 MRPL49P2-201ENST00000521066 465 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 OR4P1P-201ENST00000530808 1136 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC010546.1-201ENST00000569391 485 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 EIF1P4-201ENST00000572664 335 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC025627.2-201ENST00000576220 160 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC006270.2-201ENST00000578523 652 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AL355812.1-201ENST00000603215 216 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AP001506.1-201ENST00000615444 211 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC092125.1-201ENST00000562568 1995 ntBASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.61□□□□□ -1.67
CDK5RAP3Q96JB5 NOL8P1-201ENST00000508336 3529 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RPL32P3-201ENST00000359025 275 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-989P-201ENST00000362756 107 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-97P-201ENST00000363387 104 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RNU11-4P-201ENST00000391149 133 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP56-201ENST00000410277 118 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 BX890604.2-201ENST00000427883 474 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RPS4XP4-201ENST00000443195 763 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 SRRM1P2-201ENST00000464531 1192 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RPL7P24-201ENST00000493052 752 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC138853.1-201ENST00000503549 823 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC025554.1-201ENST00000505641 188 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MTND2P33-201ENST00000506452 1031 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 CYCSP29-201ENST00000533731 318 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 RPL21P5-201ENST00000554662 472 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC009063.1-201ENST00000563342 702 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC007599.1-201ENST00000568688 1174 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC034268.2-201ENST00000571784 482 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MIR4644-201ENST00000579929 84 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 MIR5684-201ENST00000585074 65 ntBASIC4.6□□□□□ -1.67
CDK5RAP3Q96JB5 AC010928.3-201ENST00000587712 541 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms