Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 AC007529.1-201ENST00000418574 2178 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL009179.1-201ENST00000406085 265 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 RNU2-47P-201ENST00000410649 186 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL360081.1-201ENST00000428299 555 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 HMGB1P12-201ENST00000438594 598 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 DYNLL1P5-201ENST00000467158 270 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 AC006499.3-201ENST00000506077 748 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 IGLV2-28-201ENST00000520681 304 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 AC020910.3-201ENST00000603701 874 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL670379.6-201ENST00000603753 252 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL031320.1-201ENST00000604177 357 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AC008162.1-201ENST00000604718 254 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL670379.1-201ENST00000604752 252 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL354984.3-201ENST00000604803 325 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL670379.5-201ENST00000605253 252 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL670379.8-201ENST00000605353 252 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 ATP1B3P1-201ENST00000605365 821 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 AL670379.7-201ENST00000605823 252 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 U2.17-201ENST00000611454 95 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT43Q96FT9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.68□□□□□ -1.5
IFT43Q96FT9 AC104260.2-201ENST00000623551 3497 ntBASIC5.68□□□□□ -1.5
IFT43Q96FT9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT43Q96FT9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT43Q96FT9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 RNA5SP131-201ENST00000365452 119 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 SNORD70.1-201ENST00000391007 85 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 MIR1178-201ENST00000408396 91 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 RPL21P24-201ENST00000413752 448 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 OR6E1P-201ENST00000414424 923 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 HMGB3P21-201ENST00000452483 547 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 SUMO1P2-201ENST00000452524 304 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 SNORD125-201ENST00000459538 96 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AL133445.1-201ENST00000467051 452 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC004453.1-201ENST00000487895 408 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AP002812.1-201ENST00000495378 474 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC023424.1-201ENST00000496058 459 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC116337.1-201ENST00000509680 687 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 TBCAP3-201ENST00000512475 312 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 Y_RNA.708-201ENST00000516950 96 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC022360.1-201ENST00000521058 340 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AP001922.4-201ENST00000526967 290 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC090115.3-201ENST00000553218 849 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AL138889.2-201ENST00000603883 242 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC009570.1-201ENST00000609599 745 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 SNHG22-203ENST00000617833 660 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT43Q96FT9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT43Q96FT9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT43Q96FT9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT43Q96FT9 AC068870.1-201ENST00000563737 2455 ntBASIC5.67□□□□□ -1.5
IFT43Q96FT9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
IFT43Q96FT9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
IFT43Q96FT9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT43Q96FT9 AC083843.2-201ENST00000568248 6253 ntBASIC5.66□□□□□ -1.5
IFT43Q96FT9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
IFT43Q96FT9 AC092681.1-201ENST00000297369 291 ntBASIC5.66□□□□□ -1.5
IFT43Q96FT9 RNU6-238P-201ENST00000363313 106 ntBASIC5.66□□□□□ -1.5
IFT43Q96FT9 Y_RNA.153-201ENST00000363615 91 ntBASIC5.66□□□□□ -1.5
IFT43Q96FT9 Y_RNA.257-201ENST00000364596 102 ntBASIC5.66□□□□□ -1.5
IFT43Q96FT9 RNU6-99P-201ENST00000364721 107 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms