Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TTC28Q96AY4 YWHAZP7-201ENST00000436906 631 ntBASIC2.04□□□□□ -2.08
TTC28Q96AY4 IGKV2D-36-201ENST00000518643 226 ntBASIC2.04□□□□□ -2.08
TTC28Q96AY4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 AL137100.2-201ENST00000555786 315 ntBASIC2.04□□□□□ -2.08
TTC28Q96AY4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.04□□□□□ -2.08
TTC28Q96AY4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TTC28Q96AY4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TTC28Q96AY4 MED6P1-201ENST00000439659 713 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 OR4P1P-201ENST00000530808 1136 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AL365503.1-201ENST00000605247 905 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 MTCO1P4-201ENST00000520516 1409 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC004263.1-201ENST00000479327 332 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AP002748.2-201ENST00000528671 348 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC022882.1-201ENST00000532142 501 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC098848.2-201ENST00000588023 330 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TTC28Q96AY4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TTC28Q96AY4 SEPT7P7-201ENST00000420492 1301 ntBASIC2.03□□□□□ -2.08
TTC28Q96AY4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
TTC28Q96AY4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.03□□□□□ -2.09
TTC28Q96AY4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.03□□□□□ -2.09
TTC28Q96AY4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 Y_RNA.393-201ENST00000383936 102 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC011037.1-201ENST00000483964 558 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 MYL12BP1-201ENST00000569826 507 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC084768.2-201ENST00000622736 221 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC008568.2-201ENST00000623862 2313 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC006378.2-201ENST00000623178 2476 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TTC28Q96AY4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TTC28Q96AY4 RNU2-32P-201ENST00000411193 191 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 PIGFP3-201ENST00000441918 722 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 AC099654.11-201ENST00000638857 294 ntBASIC2.02□□□□□ -2.09
TTC28Q96AY4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TTC28Q96AY4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
TTC28Q96AY4 RNU6-805P-201ENST00000365643 106 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC092155.2-201ENST00000454675 477 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 RPS29P12-201ENST00000460178 152 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 RNU6-250P-201ENST00000516958 103 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC083760.1-201ENST00000589621 670 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TTC28Q96AY4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TTC28Q96AY4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TTC28Q96AY4 GTF2H2B-203ENST00000508065 1432 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 NCSTNP1-201ENST00000406229 144 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 RPL7P46-201ENST00000425129 740 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC009474.2-201ENST00000451383 136 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC067805.1-201ENST00000559344 470 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 AC131902.3-201ENST00000611767 581 ntBASIC2.01□□□□□ -2.09
TTC28Q96AY4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TTC28Q96AY4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.01□□□□□ -2.09
TTC28Q96AY4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.01□□□□□ -2.09
TTC28Q96AY4 AL353093.1-201ENST00000441292 436 ntBASIC2□□□□□ -2.09
TTC28Q96AY4 AC017099.1-201ENST00000448261 1028 ntBASIC2□□□□□ -2.09
TTC28Q96AY4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2□□□□□ -2.09
TTC28Q96AY4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms