Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF4Q92544 AC107214.2-201ENST00000608204 634 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 AC069200.1-201ENST00000609511 323 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.6□□□□□ -1.83
TM9SF4Q92544 AC009509.4-201ENST00000619202 509 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 AC231657.1-201ENST00000624313 397 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 AC244205.2-202ENST00000635781 342 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 AC009093.8-201ENST00000641769 292 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 OR4G11P-202ENST00000642116 1414 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.6□□□□□ -1.83
TM9SF4Q92544 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM9SF4Q92544 EXOC5P1-201ENST00000510543 1969 ntBASIC3.6□□□□□ -1.83
TM9SF4Q92544 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.6□□□□□ -1.83
TM9SF4Q92544 AL353746.1-201ENST00000566293 6881 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 RNA5SP399-201ENST00000364003 117 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 RNU6-777P-201ENST00000364265 104 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 RNA5SP72-201ENST00000364442 117 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF4Q92544 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF4Q92544 OR5H15-201ENST00000383696 930 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 RNU6-723P-201ENST00000383973 107 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 MIR649-201ENST00000384843 97 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 RPL21P17-201ENST00000397467 475 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AL121972.1-201ENST00000402023 252 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC073264.1-201ENST00000411508 416 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 ZYG11AP1-201ENST00000430329 837 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC023347.2-201ENST00000433994 462 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 USP9YP7-201ENST00000436723 430 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 USP9YP32-201ENST00000452432 430 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 PRSS3P4-201ENST00000453323 162 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 SNRPGP9-201ENST00000456025 225 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 RPS15AP17-201ENST00000470598 390 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC090071.1-201ENST00000507713 644 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 CBX3P3-201ENST00000508108 532 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF4Q92544 RNU6-150P-201ENST00000516237 95 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 Vault.1-201ENST00000516474 102 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 IGKV2-23-201ENST00000518729 323 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC022880.1-201ENST00000534017 973 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AL133457.1-201ENST00000564251 987 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC087499.8-201ENST00000578406 226 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 MIR3611-201ENST00000584484 83 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AL049634.3-201ENST00000604968 457 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AP003117.2-201ENST00000606010 545 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AP000254.1-201ENST00000609934 520 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF4Q92544 AC006927.3-201ENST00000638789 384 ntBASIC3.59□□□□□ -1.83
TM9SF4Q92544 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF4Q92544 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TM9SF4Q92544 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TM9SF4Q92544 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF4Q92544 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF4Q92544 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF4Q92544 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF4Q92544 RNA5SP387-201ENST00000364226 106 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 Y_RNA.333-201ENST00000365274 102 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 RNU6-761P-201ENST00000384148 107 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TM9SF4Q92544 ARF4P3-201ENST00000397387 509 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AL355379.1-201ENST00000405542 640 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 RPS29P4-201ENST00000414733 161 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 RPL31P45-201ENST00000419532 356 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 RPL7P30-201ENST00000420888 709 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.58□□□□□ -1.84
TM9SF4Q92544 AC105402.2-201ENST00000438503 358 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AL512286.1-201ENST00000439244 400 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF4Q92544 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF4Q92544 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF4Q92544 COX6CP2-201ENST00000444980 225 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 USP9YP29-201ENST00000445112 563 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 ELOCP30-201ENST00000447108 299 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 NANOGP10-201ENST00000453325 895 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 MTCO3P2-201ENST00000457365 171 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 RNU6-956P-201ENST00000458868 103 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 MEMO1P3-201ENST00000459811 302 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AC097493.1-201ENST00000463958 372 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AC087879.1-201ENST00000474343 374 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 TMEM251P1-201ENST00000503717 318 ntBASIC3.58□□□□□ -1.84
TM9SF4Q92544 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF4Q92544 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
TM9SF4Q92544 SNORA70.14-201ENST00000516205 110 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms