Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR320B1-201ENST00000390209 79 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 RNU6-796P-201ENST00000391086 107 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.54□□□□□ -2
SHROOM3Q8TF72 VTA1P1-201ENST00000414044 866 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 BX664727.1-201ENST00000416024 466 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 NANOGP5-201ENST00000424456 877 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 VN1R42P-201ENST00000424651 344 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 MTCO3P21-201ENST00000430791 643 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM3Q8TF72 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 COX6CP2-201ENST00000444980 225 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 CASP3P1-201ENST00000446037 609 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 RPL36AP33-201ENST00000450395 310 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 snoU13.18-201ENST00000459483 104 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM3Q8TF72 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM3Q8TF72 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM3Q8TF72 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM3Q8TF72 RPL23AP84-201ENST00000571193 464 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 TMF1P1-201ENST00000576058 373 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 NTAN1P1-201ENST00000603150 646 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM3Q8TF72 AC023813.4-201ENST00000607580 580 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 MIR7973-1-201ENST00000614683 76 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.54□□□□□ -2
SHROOM3Q8TF72 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SHROOM3Q8TF72 AC104454.1-201ENST00000421341 1401 ntBASIC2.54□□□□□ -2
SHROOM3Q8TF72 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHROOM3Q8TF72 Y_RNA.40-201ENST00000362645 93 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 SNORA63.3-201ENST00000362682 132 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 SNORA36C-201ENST00000384289 132 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 RNFT1P2-201ENST00000443064 757 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 MTND2P8-201ENST00000450555 1025 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 AC078857.1-201ENST00000469870 667 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 OR4G11P-201ENST00000492842 939 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 SUMO1P1-201ENST00000497904 306 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 MTCO2P9-201ENST00000503214 694 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 AC068446.3-201ENST00000555285 382 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 AC007938.3-201ENST00000604965 623 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 AC099778.2-201ENST00000610904 211 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 AP006248.3-201ENST00000623580 594 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 PHKBP1-201ENST00000450951 1951 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SHROOM3Q8TF72 MTCO1P14-201ENST00000441695 1559 ntBASIC2.53□□□□□ -2
SHROOM3Q8TF72 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHROOM3Q8TF72 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.53□□□□□ -2.01
SHROOM3Q8TF72 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 RNA5SP99-201ENST00000364020 114 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 RNU4-31P-201ENST00000384211 141 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 BTF3P7-201ENST00000407097 488 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 MTCO3P4-201ENST00000419236 787 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 HMGB1P15-201ENST00000453854 435 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 HSPE1P22-201ENST00000456856 327 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 RN7SKP210-201ENST00000459176 261 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC010198.2-201ENST00000550612 259 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC078899.3-201ENST00000599065 212 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC090525.3-201ENST00000605601 189 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 U6.48-201ENST00000618523 106 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC110994.2-201ENST00000635481 492 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 NSRP1P1-201ENST00000444067 1693 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 UBE2V1P11-201ENST00000411559 285 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 MRPL50P2-201ENST00000416821 482 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 UBE2D3P3-201ENST00000426992 425 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 RPL23AP15-201ENST00000450202 459 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AL645939.1-201ENST00000453429 797 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 OR6K1P-201ENST00000456766 971 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 VN1R17P-201ENST00000472048 1090 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC015908.1-201ENST00000478739 476 ntBASIC2.52□□□□□ -2.01
SHROOM3Q8TF72 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms