Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RPS15AP1-201ENST00000457423 391 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 snoU13.3-201ENST00000459441 104 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 SYPL1P1-201ENST00000473622 768 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 HMGN2P13-201ENST00000476476 274 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AL024509.2-201ENST00000493462 493 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 RNU6-1073P-201ENST00000517182 106 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AL512310.1-201ENST00000548639 172 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC079089.3-201ENST00000603094 673 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AL590282.1-201ENST00000610379 1136 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AL162233.1-201ENST00000620014 944 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AC084035.1-201ENST00000634543 607 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 RNA5SP289-201ENST00000362332 137 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 RNU6-883P-201ENST00000384597 107 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 MIR1303-201ENST00000408625 86 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 MIR1261-201ENST00000408659 82 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 RNA5SP129-201ENST00000410276 118 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 HMGB3P31-201ENST00000413333 595 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 RPL7P46-201ENST00000425129 740 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC233982.1-201ENST00000451247 436 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 ANXA2P1-201ENST00000505539 926 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC109329.2-201ENST00000519658 482 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AP004371.1-201ENST00000525240 214 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AP003122.3-201ENST00000526316 255 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC109635.4-202ENST00000531666 412 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC007536.1-201ENST00000533382 349 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 YWHAQP7-201ENST00000603536 658 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC091488.1-201ENST00000604239 660 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AP001033.2-201ENST00000609701 1003 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 VIS1.1-201ENST00000610517 203 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC073348.1-201ENST00000623002 331 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 CR381653.2-201ENST00000624041 768 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 AC064859.1-201ENST00000624741 174 ntBASIC2.48□□□□□ -2.01
LMX1AQ8TE12 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LMX1AQ8TE12 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 API5P2-201ENST00000397055 1498 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 RNU6-1243P-201ENST00000364028 107 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 RNU1-101P-201ENST00000391171 127 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 RPS3AP26-201ENST00000398259 784 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AL121972.1-201ENST00000402023 252 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 RPS4XP7-201ENST00000406274 780 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 MTCO1P39-201ENST00000426148 480 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 RPL17P49-201ENST00000443728 411 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC068135.1-201ENST00000446164 246 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 MTND2P6-201ENST00000455337 1030 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC025181.1-201ENST00000477507 416 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 SNORD59.2-201ENST00000516873 68 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC025918.2-201ENST00000558683 763 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC233266.2-201ENST00000567067 528 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC022069.1-201ENST00000582910 658 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC006116.7-201ENST00000590141 756 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC087241.4-201ENST00000612441 480 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AC006963.1-201ENST00000624003 1052 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms