Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC018628.1-201ENST00000624147 3819 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 AL355834.1-201ENST00000556602 3965 ntBASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NKX2-3Q8TAU0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC005183.1-201ENST00000603687 1979 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-97P-201ENST00000363387 104 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC016769.3-201ENST00000396562 315 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AL136372.1-201ENST00000403060 228 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC114491.1-201ENST00000416095 246 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC022022.1-201ENST00000430304 178 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AL353597.2-202ENST00000434901 373 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 OR6D1P-201ENST00000436165 939 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AL596266.1-201ENST00000448132 400 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AL031274.1-201ENST00000450334 232 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 snoU13.29-201ENST00000459370 104 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC091021.1-201ENST00000468051 388 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 RPS29P22-201ENST00000472363 168 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC021382.1-201ENST00000483523 359 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 IGKV2-23-201ENST00000518729 323 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-323P-201ENST00000521915 107 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC100784.1-201ENST00000522790 310 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 AC060780.2-201ENST00000589047 198 ntBASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.61□□□□□ -1.35
NKX2-3Q8TAU0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RNA5SP183-201ENST00000362452 119 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 U8.4-201ENST00000363626 134 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-596P-201ENST00000365395 98 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-214P-201ENST00000384130 107 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RNU6-921P-201ENST00000384361 107 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 SNORA22C-201ENST00000384614 134 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RPL30P2-201ENST00000414021 291 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC007161.1-204ENST00000423039 460 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 FAR2P4-202ENST00000425399 584 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RPS26P40-201ENST00000435209 294 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 OR2AQ1P-201ENST00000451972 200 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AZGP1P2-201ENST00000454506 345 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RPL23AP31-201ENST00000456160 467 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RPS23P2-201ENST00000463671 415 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 RN7SL51P-201ENST00000468230 285 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC144568.1-201ENST00000520139 137 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 DEFB108E-201ENST00000524692 240 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC024405.2-202ENST00000532731 184 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 HNRNPCP4-201ENST00000571636 900 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 COX6CP3-201ENST00000580869 223 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC008162.1-201ENST00000604718 254 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC072026.1-201ENST00000605023 201 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AL670379.4-201ENST00000605279 254 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AC009570.1-201ENST00000609599 745 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 uc_338.9-201ENST00000617424 182 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AL391684.1-202ENST00000641293 1636 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 AL353796.1-201ENST00000561542 3241 ntBASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NKX2-3Q8TAU0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
NKX2-3Q8TAU0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms