Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL359893.1-201ENST00000447628 1580 ntBASIC2.77□□□□□ -1.97
LINC01006Q8NI28 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
LINC01006Q8NI28 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
LINC01006Q8NI28 PNPT1P2-201ENST00000456768 2050 ntBASIC2.77□□□□□ -1.97
LINC01006Q8NI28 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 RPL21P132-201ENST00000331267 462 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 Y_RNA.111-201ENST00000363248 100 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 RN7SKP44-201ENST00000363602 316 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 RNU6-777P-201ENST00000364265 104 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 RPL31P1-201ENST00000398116 372 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AL355379.1-201ENST00000405542 640 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MIR1250-201ENST00000408098 113 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 RAC1P3-201ENST00000416129 580 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 RPL7P30-201ENST00000420888 709 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC093698.1-201ENST00000423843 571 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 CKS1BP5-201ENST00000434172 273 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC097262.1-201ENST00000452559 548 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MTCO3P11-201ENST00000455103 774 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 BTF3P5-201ENST00000457252 467 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MEMO1P3-201ENST00000459811 302 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC023598.1-201ENST00000472521 361 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC072039.1-201ENST00000477611 581 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MTND1P22-201ENST00000510572 951 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 OR6C73P-201ENST00000546432 358 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AP005136.1-201ENST00000579765 429 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 OR4G1P-201ENST00000588632 938 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AL596327.1-201ENST00000603629 213 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 YPEL5P2-201ENST00000605553 359 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 BRDTP1-201ENST00000605735 677 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 AC090116.1-201ENST00000615679 446 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MIR8057-201ENST00000620957 69 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 PCMTD1P7-201ENST00000634506 357 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MAPK10-253ENST00000641010 4072 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 OR4G11P-202ENST00000642116 1414 ntBASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.76□□□□□ -1.97
LINC01006Q8NI28 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 MTCO1P23-201ENST00000415223 1526 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 AC007656.2-201ENST00000624902 4547 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 FRG1CP-201ENST00000358464 769 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 Y_RNA.18-201ENST00000362461 102 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 Y_RNA.302-201ENST00000364997 102 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 SNORD82-201ENST00000365530 70 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 SNORD116-1-201ENST00000384335 95 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 MIR128-1-201ENST00000384921 82 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 AC096664.2-201ENST00000411843 406 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 BX323014.1-201ENST00000412876 237 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 ZYG11AP1-201ENST00000430329 837 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 MTND4P32-201ENST00000437189 1237 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 DNAJC19P1-201ENST00000455312 319 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 RNU7-136P-201ENST00000458819 69 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 AC010468.1-201ENST00000461022 817 ntBASIC2.75□□□□□ -1.97
LINC01006Q8NI28 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01006Q8NI28 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms