Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AADACP1-206ENST00000561502 1193 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC012182.1-201ENST00000570133 895 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AC092474.3-201ENST00000603022 568 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AL033523.1-201ENST00000605153 153 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 CYP3A51P-201ENST00000633513 256 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 FO624990.1-201ENST00000636373 85 ntBASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC112Q8NEF3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 NACA3P-201ENST00000359690 648 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 SNORA80E-201ENST00000384744 137 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 MIR1303-201ENST00000408625 86 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 RNA5SP184-201ENST00000411071 108 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 UBE2V1P6-201ENST00000430840 422 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 YWHAZP8-201ENST00000436935 731 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AL135938.1-201ENST00000443141 297 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 RPL31P50-201ENST00000471002 296 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 HMGB1P3-201ENST00000502802 616 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 RNA5SP282-201ENST00000516355 108 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 OSBPL9P3-201ENST00000534523 595 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 EIF1AXP2-201ENST00000555940 413 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 MIR3162-201ENST00000581818 82 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 MIR4672-201ENST00000583126 81 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AP001029.3-201ENST00000588063 596 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 NTAN1P1-201ENST00000603150 646 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 AC119674.1-220ENST00000641502 1048 ntBASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC112Q8NEF3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 RNA5SP38-201ENST00000410750 119 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 AC087499.2-201ENST00000432861 149 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 RAD1P2-201ENST00000446414 663 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 DNAJC19P8-201ENST00000452887 259 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 snoU13.4-201ENST00000458916 104 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 AP000852.1-201ENST00000472460 573 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 RPS29P26-201ENST00000477483 171 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 RPL7L1P13-201ENST00000511702 739 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 AC139103.1-201ENST00000534696 1030 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 PRELID2P1-201ENST00000552837 301 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 AC006249.1-201ENST00000621223 471 ntBASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC112Q8NEF3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 CUL1P1-201ENST00000509510 2425 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 MTND4P8-201ENST00000514997 1362 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 RNU6-374P-201ENST00000364146 108 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 SNORD56.5-201ENST00000364281 72 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 RNU1-138P-201ENST00000384093 164 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AL162578.1-201ENST00000406202 378 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 DHFRP5-201ENST00000406944 564 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 VN1R51P-201ENST00000411675 945 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC080125.1-201ENST00000414888 684 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC063976.3-201ENST00000426849 329 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC015908.1-201ENST00000478739 476 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC025459.1-201ENST00000504072 156 ntBASIC2.8□□□□□ -1.96
CCDC112Q8NEF3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms