Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TAF9BP1-201ENST00000396646 746 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 Z99755.1-201ENST00000414048 380 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AL117339.2-201ENST00000430475 180 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 RABEPKP1-201ENST00000440529 1026 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 RPL21P89-201ENST00000444021 467 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 Z73417.1-201ENST00000447373 778 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 Z99127.3-201ENST00000448158 395 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 RPL21P134-201ENST00000453468 483 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 MTND1P16-201ENST00000465177 898 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC104472.2-201ENST00000469035 601 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 RPS23P3-201ENST00000470993 430 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 KLRA1P-201ENST00000503499 986 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 TMEM251P1-201ENST00000503717 318 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC245166.1-201ENST00000521012 253 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 MTCO2P15-201ENST00000532655 656 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC010653.1-201ENST00000571108 881 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 MTATP6P24-201ENST00000576835 677 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC055876.5-201ENST00000605667 259 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC107952.2-201ENST00000606048 486 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC080013.3-201ENST00000606839 578 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AC006111.3-201ENST00000622137 383 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AP002782.1-201ENST00000623107 614 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 MIR1322-201ENST00000638013 71 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 SNORA56-201ENST00000383966 129 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-878P-201ENST00000384578 110 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RPL7P60-201ENST00000397636 735 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 DHFRP6-201ENST00000401776 268 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RNA5SP317-201ENST00000410176 116 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RNU2-47P-201ENST00000410649 186 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RNA5SP311-201ENST00000411290 116 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 NDUFB4P5-201ENST00000415445 361 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AL008987.1-201ENST00000415528 237 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC006960.1-201ENST00000419980 153 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 XKRYP1-201ENST00000423438 492 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 USP9YP11-201ENST00000427537 717 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC104332.2-201ENST00000429959 156 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 XKRYP2-201ENST00000432915 492 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 MTND4LP10-201ENST00000435146 291 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 SNRPEP4-201ENST00000435815 279 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 snoU13.4-201ENST00000458916 104 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RPS15AP17-201ENST00000470598 390 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 WBP1LP4-201ENST00000505043 344 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 POU5F1P7-201ENST00000508759 541 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RNA5SP385-201ENST00000515947 110 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RNA5SP315-201ENST00000516340 116 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 RNA5SP312-201ENST00000517068 116 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 C1GALT1P3-201ENST00000522049 819 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 EEF1A1P37-201ENST00000522748 715 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 SLC2A13P1-201ENST00000531560 322 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 NBEAP1-201ENST00000554452 979 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 MIR4506-201ENST00000584693 77 ntBASIC2.82□□□□□ -1.96
CCDC71LQ8N9Z2 BNIP3P24-201ENST00000593398 557 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms