Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC005951.1-201ENST00000576706 485 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 NRBF2P1-201ENST00000587407 859 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC034102.8-201ENST00000615146 484 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 MTCO1P6-201ENST00000481192 1384 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AL355578.1-201ENST00000607405 1328 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 RPL7P46-201ENST00000425129 740 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 RPS7P5-201ENST00000441482 581 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AL161713.1-201ENST00000555538 145 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.1□□□□□ -1.91
VPS8Q8N3P4 SNRPGP19-201ENST00000603826 189 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC010680.4-201ENST00000605334 543 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC025754.2-201ENST00000606491 432 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AL589935.2-201ENST00000616471 1231 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC244517.12-201ENST00000623581 663 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 AC103798.2-201ENST00000624292 632 ntBASIC3.1□□□□□ -1.91
VPS8Q8N3P4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS8Q8N3P4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VPS8Q8N3P4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.09□□□□□ -1.92
VPS8Q8N3P4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.09□□□□□ -1.92
VPS8Q8N3P4 DPPA2P1-201ENST00000428060 556 ntBASIC3.09□□□□□ -1.92
VPS8Q8N3P4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.09□□□□□ -1.92
VPS8Q8N3P4 HMGN2P23-201ENST00000456759 269 ntBASIC3.09□□□□□ -1.92
VPS8Q8N3P4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.92
VPS8Q8N3P4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.09□□□□□ -1.92
VPS8Q8N3P4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.09□□□□□ -1.92
VPS8Q8N3P4 AC092650.2-201ENST00000619984 902 ntBASIC3.09□□□□□ -1.92
VPS8Q8N3P4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.09□□□□□ -1.92
VPS8Q8N3P4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS8Q8N3P4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS8Q8N3P4 MTCO1P43-201ENST00000431831 488 ntBASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AC104058.1-201ENST00000448028 297 ntBASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AC009961.3-201ENST00000449832 765 ntBASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS8Q8N3P4 MTAPP1-201ENST00000489154 819 ntBASIC3.08□□□□□ -1.92
VPS8Q8N3P4 TMEM248P1-201ENST00000510579 951 ntBASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AK6P1-201ENST00000540219 478 ntBASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AL450472.3-201ENST00000615578 367 ntBASIC3.08□□□□□ -1.92
VPS8Q8N3P4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VPS8Q8N3P4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS8Q8N3P4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS8Q8N3P4 USP9YP27-201ENST00000418455 438 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS8Q8N3P4 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 SETP8-201ENST00000435341 628 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 AC003989.2-201ENST00000440224 169 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 AC022790.1-201ENST00000522872 204 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS8Q8N3P4 RPS3AP23-202ENST00000574601 686 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 ISCA1P3-201ENST00000577104 373 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 PSMA6P4-201ENST00000603247 718 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 AC091488.1-201ENST00000604239 660 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 AC018754.1-201ENST00000607486 925 ntBASIC3.07□□□□□ -1.92
VPS8Q8N3P4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VPS8Q8N3P4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS8Q8N3P4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS8Q8N3P4 MIR9-3-201ENST00000385084 90 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC092638.1-201ENST00000411966 1275 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC009237.8-201ENST00000445492 379 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC108210.2-201ENST00000503681 201 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC018630.1-201ENST00000541376 925 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC015712.3-201ENST00000559380 164 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS8Q8N3P4 MTND2P13-201ENST00000577438 1039 ntBASIC3.06□□□□□ -1.92
VPS8Q8N3P4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS8Q8N3P4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS8Q8N3P4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VPS8Q8N3P4 AC027124.2-201ENST00000428249 105 ntBASIC3.05□□□□□ -1.92
VPS8Q8N3P4 AC092754.2-201ENST00000463506 460 ntBASIC3.05□□□□□ -1.92
VPS8Q8N3P4 RPS29P11-201ENST00000496507 171 ntBASIC3.05□□□□□ -1.92
VPS8Q8N3P4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.05□□□□□ -1.92
VPS8Q8N3P4 LDHBP3-201ENST00000514909 822 ntBASIC3.05□□□□□ -1.92
VPS8Q8N3P4 SNORA31.11-201ENST00000516528 139 ntBASIC3.05□□□□□ -1.92
VPS8Q8N3P4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS8Q8N3P4 AC110588.1-201ENST00000559699 137 ntBASIC3.05□□□□□ -1.92
VPS8Q8N3P4 AC131902.3-201ENST00000611767 581 ntBASIC3.05□□□□□ -1.92
VPS8Q8N3P4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS8Q8N3P4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VPS8Q8N3P4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
VPS8Q8N3P4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS8Q8N3P4 RNA5SP37-201ENST00000365420 130 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 AC008173.1-201ENST00000418901 264 ntBASIC3.04□□□□□ -1.92
VPS8Q8N3P4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS8Q8N3P4 RSL24D1P2-201ENST00000445584 366 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms