Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CYCSP32-201ENST00000440548 321 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL121871.1-201ENST00000443413 436 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 HMGN2P21-201ENST00000447764 270 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 CYCSP35-201ENST00000451978 304 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 HMGB1P25-201ENST00000468402 607 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC034159.1-201ENST00000513885 583 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 RN7SKP18-201ENST00000516005 275 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AP004371.1-201ENST00000525240 214 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC135628.1-201ENST00000568867 534 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 MIR5187-201ENST00000583479 76 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC010928.3-201ENST00000587712 541 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL031985.2-201ENST00000600955 480 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC004853.1-201ENST00000604902 698 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC005000.2-201ENST00000605468 310 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC106028.5-201ENST00000610332 395 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 MIR4727-201ENST00000622232 55 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 C2orf27A-204ENST00000623058 969 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC007494.3-201ENST00000624660 743 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC012321.1-201ENST00000561622 1588 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL049780.3-201ENST00000624612 1583 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC092447.10-201ENST00000620607 1652 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 AC004925.1-201ENST00000624256 2706 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 PRO1804-201ENST00000623780 2050 ntBASIC4.22□□□□□ -1.73
HERC6Q8IVU3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
HERC6Q8IVU3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
HERC6Q8IVU3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL672167.1-206ENST00000356293 943 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 RNU6-97P-201ENST00000363387 104 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 SNORD116-2-201ENST00000384274 95 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 SNORD116-6-201ENST00000384711 96 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL356421.1-201ENST00000403255 413 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 RAC1P3-201ENST00000416129 580 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL117351.1-201ENST00000438864 766 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC106038.2-201ENST00000520706 568 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL365503.1-201ENST00000605247 905 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC105129.3-201ENST00000605455 485 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC097468.3-201ENST00000607956 456 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC107214.2-201ENST00000608204 634 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC064801.1-201ENST00000612025 407 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL139089.1-201ENST00000620372 975 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AL356585.4-201ENST00000623078 1229 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 CR383658.2-201ENST00000547576 1525 ntBASIC4.21□□□□□ -1.74
HERC6Q8IVU3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.21□□□□□ -1.74
HERC6Q8IVU3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 RNU5F-7P-201ENST00000363696 115 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 RNU6-501P-201ENST00000364072 100 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 RNU6-660P-201ENST00000364566 109 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 RNU6-744P-201ENST00000365557 107 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 RNU6-712P-201ENST00000410558 100 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AC009518.2-201ENST00000418056 731 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AL137014.1-201ENST00000420490 1226 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AC099677.1-201ENST00000420575 175 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AL512649.1-201ENST00000428997 581 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AL353691.1-201ENST00000451332 387 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AC010468.1-201ENST00000461022 817 ntBASIC4.2□□□□□ -1.74
HERC6Q8IVU3 AC078817.1-201ENST00000492623 435 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms