Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MIR3074-201ENST00000384885 81 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 NDUFB4P5-201ENST00000415445 361 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC093151.1-201ENST00000427711 313 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 RPL23AP76-201ENST00000441860 458 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AL645944.1-201ENST00000603857 493 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AL627309.6-201ENST00000606857 840 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC092650.2-201ENST00000619984 902 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 MTND5P27-201ENST00000428871 1720 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 Y_RNA.295-201ENST00000364918 102 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC098583.1-201ENST00000480875 255 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AP000889.2-201ENST00000532684 490 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.44□□□□□ -2.18
CSMD3Q7Z407 BX664608.1-201ENST00000610519 487 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC067852.7-201ENST00000623270 535 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 AC009501.3-201ENST00000605001 1352 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC104332.2-201ENST00000429959 156 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 APOOP1-201ENST00000604695 592 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC012360.2-201ENST00000609349 391 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 MIR6504-201ENST00000613520 61 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 CYP3A51P-201ENST00000633513 256 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC002543.1-201ENST00000299783 1954 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 RNU1-138P-201ENST00000384093 164 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 RPL7P37-201ENST00000425095 738 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 CACYBPP1-201ENST00000438592 684 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC017007.3-201ENST00000479865 435 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 MIR219B-201ENST00000637023 88 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AC066616.2-201ENST00000559334 1481 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 MIR142-201ENST00000384835 87 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 NDUFB4P6-201ENST00000436819 366 ntBASIC1.43□□□□□ -2.18
CSMD3Q7Z407 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CSMD3Q7Z407 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 RNU2-6P-201ENST00000411404 190 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 RPS15AP12-201ENST00000419498 388 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 SDCBPP3-201ENST00000419629 891 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 RPS27P27-201ENST00000498779 255 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 SNRPGP19-201ENST00000603826 189 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 AC107871.2-201ENST00000612894 502 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 RNU1-91P-201ENST00000364746 163 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 AL445685.2-201ENST00000422551 342 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 RPS7P2-201ENST00000435134 607 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 GAPDHP27-201ENST00000447427 1020 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 RPL5P13-201ENST00000462840 709 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 RPL9P33-201ENST00000484311 566 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 AC090543.1-201ENST00000492168 485 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 AC092798.1-201ENST00000458542 409 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 ADAM3A-203ENST00000461344 2157 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 KPNA2P1-201ENST00000458289 1591 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSMD3Q7Z407 ZNF355P-201ENST00000427301 3216 ntBASIC1.42□□□□□ -2.18
CSMD3Q7Z407 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 CR382285.2-201ENST00000624662 1495 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms