Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC023598.1-201ENST00000472521 361 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC055855.1-201ENST00000489563 579 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 OR51K1P-201ENST00000510214 950 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 EDDM3DP-201ENST00000554692 434 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 HMGB1P33-201ENST00000563485 527 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC006270.2-201ENST00000578523 652 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL391646.1-201ENST00000603860 190 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL451044.1-201ENST00000604867 238 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AL160290.3-201ENST00000604869 165 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 Z98200.1-201ENST00000607298 470 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AP001596.2-201ENST00000608410 312 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC040168.1-201ENST00000623594 991 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC011460.1-201ENST00000636268 1834 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 AC006971.1-201ENST00000407916 4486 ntBASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCHD4Q6ZW05 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC021146.4-201ENST00000309229 279 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 RNY4P14-201ENST00000363656 96 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 RNY4P16-201ENST00000364768 94 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 Y_RNA.402-201ENST00000383972 102 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 USP9YP6-201ENST00000413550 854 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 RAC1P3-201ENST00000416129 580 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC007283.2-201ENST00000424739 197 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC006548.1-201ENST00000427470 102 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 MTCO2P19-201ENST00000427513 598 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 UBE2V1P13-201ENST00000436983 439 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 PTMAP6-201ENST00000439110 327 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AL353748.1-201ENST00000440753 474 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 Z95327.1-201ENST00000446082 482 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC012671.1-201ENST00000451912 203 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 RPL23AP41-201ENST00000484754 458 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC078817.1-201ENST00000492623 435 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC108145.1-201ENST00000503770 153 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 PARP4P3-201ENST00000510265 317 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 PHBP17-201ENST00000528576 541 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 SETP2-201ENST00000553886 926 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AP005205.1-201ENST00000563503 508 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 MIR3167-201ENST00000579623 85 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 MIR4646-201ENST00000580775 63 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 RN7SL753P-201ENST00000581238 290 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC068790.3-201ENST00000602988 553 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC104458.1-201ENST00000608243 463 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC006329.2-201ENST00000611491 394 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AL590099.1-201ENST00000615276 138 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AC090510.2-201ENST00000617465 629 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 AL008636.1-201ENST00000625038 1018 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 CR381572.1-201ENST00000625098 102 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 NOL8P1-201ENST00000508336 3529 ntBASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCHD4Q6ZW05 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms