Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 OR2AS1P-201ENST00000427827 319 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 DPPA2P1-201ENST00000428060 556 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 ATP5JP1-201ENST00000431631 322 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 RPL21P112-201ENST00000434403 463 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 HMGB3P11-201ENST00000440127 604 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 RPS3AP12-201ENST00000443616 753 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 MTCO2P25-201ENST00000447065 681 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 PTENP1-201ENST00000447117 1215 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC104978.1-201ENST00000449387 391 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 RPL23AP15-201ENST00000450202 459 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 USP9YP25-201ENST00000457708 443 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 VN1R17P-201ENST00000472048 1090 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 RNU5A-4P-201ENST00000516588 111 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 RNU6-885P-201ENST00000516607 104 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AP001207.1-201ENST00000524051 481 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC023538.1-201ENST00000534576 736 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC074029.1-201ENST00000552531 1044 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 NBEAP1-201ENST00000554452 979 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 CENPUP2-201ENST00000555897 1186 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 NCAPGP2-201ENST00000557911 754 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC090888.2-201ENST00000559765 1144 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 MIR5186-201ENST00000577504 120 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 BNIP3P26-201ENST00000600827 554 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AL136164.4-201ENST00000625013 2135 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC026634.1-201ENST00000634369 198 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC084035.1-201ENST00000634543 607 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC097655.1-201ENST00000635075 318 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 AC011978.2-201ENST00000569835 2054 ntBASIC3.03□□□□□ -1.92
ZNF544Q6NX49 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF544Q6NX49 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.03□□□□□ -1.93
ZNF544Q6NX49 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 RNU6-251P-201ENST00000363235 104 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 RNA5SP267-201ENST00000364893 126 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 RNU6-761P-201ENST00000384148 107 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 RNU6-83P-201ENST00000384568 112 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 U3.19-201ENST00000390893 196 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 MIR887-201ENST00000401258 79 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 EI24P1-201ENST00000416584 867 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC012065.2-201ENST00000421295 375 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AL513175.1-201ENST00000431492 780 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC010881.1-201ENST00000433830 235 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 YWHAZP7-201ENST00000436906 631 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 COX7BP2-201ENST00000437976 242 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 MTND1P26-201ENST00000440488 538 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AL034418.1-201ENST00000448675 860 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 MTND1P31-201ENST00000449206 961 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC004263.1-201ENST00000479327 332 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC109471.1-201ENST00000511631 612 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC008837.2-201ENST00000513076 418 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 SNORA70.18-201ENST00000516696 98 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC007458.1-201ENST00000542812 373 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC087465.1-201ENST00000560574 245 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AL390838.2-201ENST00000602394 274 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AL133393.1-201ENST00000603277 287 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC012468.1-201ENST00000604888 430 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC004832.5-201ENST00000608677 401 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF544Q6NX49 MIR6864-201ENST00000617935 70 ntBASIC3.02□□□□□ -1.93
ZNF544Q6NX49 AC022509.4-201ENST00000621404 572 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms