Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PRPF40BQ6NWY9 SMG1P4-204ENST00000523028 4131 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 MTND5P33-201ENST00000571250 1450 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 MTND4P27-201ENST00000450813 1354 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 Y_RNA.138-201ENST00000363462 102 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 SNORA70C-201ENST00000384538 135 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 SSXP10-201ENST00000402595 565 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 GNG5P5-201ENST00000420444 220 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AL358176.3-201ENST00000420757 454 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AC108734.1-201ENST00000439549 399 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 MTCYBP6-201ENST00000441810 138 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AL356010.1-201ENST00000456364 102 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 RPL36AP41-201ENST00000493820 306 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 HMGB3P16-201ENST00000508037 287 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 PSMA2P1-201ENST00000526365 646 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 SNORA74C-1-201ENST00000580726 201 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AC060771.1-201ENST00000582031 164 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 NF1P5-201ENST00000588287 448 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 ARF4P1-201ENST00000605447 541 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AC130324.3-201ENST00000614165 542 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AC114781.5-201ENST00000615297 108 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AC123768.4-201ENST00000616244 701 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 OR14L1P-202ENST00000641545 3009 ntBASIC5.84□□□□□ -1.47
PRPF40BQ6NWY9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
PRPF40BQ6NWY9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PRPF40BQ6NWY9 AC130650.2-201ENST00000618736 2403 ntBASIC5.84□□□□□ -1.48
PRPF40BQ6NWY9 ZNF137P-201ENST00000456718 1920 ntBASIC5.84□□□□□ -1.48
PRPF40BQ6NWY9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 MTND4P35-201ENST00000604257 1375 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.234-201ENST00000364409 97 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RNU6-1293P-201ENST00000384077 107 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 U3.20-201ENST00000390909 217 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RPL7AP25-201ENST00000423357 805 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RN7SL303P-201ENST00000469773 251 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AL163973.1-201ENST00000484753 577 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RPS15AP36-201ENST00000492022 382 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RNU6-513P-201ENST00000516104 104 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RNU6-1314P-201ENST00000517139 104 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 IGLVIV-65-201ENST00000517313 360 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 BNIP3P6-201ENST00000549284 499 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 MIR92B-201ENST00000607575 96 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AC023043.4-201ENST00000612081 449 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AC104237.2-201ENST00000612456 443 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AP005019.3-201ENST00000620418 560 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RNU6-156P-201ENST00000621869 107 ntBASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRPF40BQ6NWY9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 RNA5SP391-201ENST00000363456 119 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 SNORA71.2-201ENST00000364941 134 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 RNU1-64P-201ENST00000365443 163 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 RNU6-1226P-201ENST00000384317 107 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 RNU6-606P-201ENST00000384721 111 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL356387.2-201ENST00000422272 243 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 DUTP6-201ENST00000425573 462 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms