Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HMGB1P21-201ENST00000502313 581 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 TBCAP3-201ENST00000512475 312 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 RNU6-1016P-201ENST00000516689 94 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 RPL10P14-201ENST00000565265 298 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 AC113195.1-201ENST00000579952 141 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 AL365434.2-201ENST00000607979 234 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 OR55B1P-203ENST00000641518 2602 ntBASIC6.28□□□□□ -1.4
RNF20Q5VTR2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF20Q5VTR2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.27□□□□□ -1.4
RNF20Q5VTR2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 MTND5P28-201ENST00000438005 1594 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 RNU1-146P-201ENST00000364015 165 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 RNA5SP242-201ENST00000364171 118 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 RNA5SP132-201ENST00000364725 118 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 RNU2-15P-201ENST00000410692 191 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 COX5BP7-201ENST00000414780 274 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC093655.2-201ENST00000425735 631 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC093106.2-201ENST00000428212 385 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC104564.1-201ENST00000493028 407 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 RNU6-699P-201ENST00000517081 110 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC023442.1-201ENST00000531247 422 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC126177.5-201ENST00000549599 178 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AL133153.1-201ENST00000557756 303 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC040958.1-201ENST00000561102 201 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC007342.5-201ENST00000571340 2142 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC022884.2-201ENST00000578535 580 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC008814.1-201ENST00000603797 406 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC104695.3-201ENST00000604052 296 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AL031320.1-201ENST00000604177 357 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 ATP1B3P1-201ENST00000605365 821 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC009229.3-201ENST00000608056 282 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC004696.1-201ENST00000614345 607 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 ATP5A1P2-202ENST00000616464 443 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC103705.1-201ENST00000619013 241 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC055839.1-201ENST00000634467 498 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 SMG1P7-201ENST00000565246 2704 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC092747.4-201ENST00000620519 1861 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AC093849.1-201ENST00000563631 2209 ntBASIC6.27□□□□□ -1.41
RNF20Q5VTR2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RNF20Q5VTR2 AL034549.2-201ENST00000618285 3373 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 TPTE2P4-201ENST00000258589 1605 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RNU6-593P-201ENST00000364716 112 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 Y_RNA.307-201ENST00000365022 117 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RNU5E-6P-201ENST00000365574 115 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RNU1-74P-201ENST00000384108 171 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 Y_RNA.496-201ENST00000384444 101 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RPL21P67-201ENST00000402896 478 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RNU4-46P-201ENST00000410818 138 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RPL30P2-201ENST00000414021 291 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 GJA6P-201ENST00000415117 1042 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AL031736.2-201ENST00000426573 787 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 SNAP23P1-201ENST00000433229 246 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RPL12P11-201ENST00000439970 501 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RPS24P13-201ENST00000442520 397 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AC016696.1-201ENST00000446949 318 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 SNORD121B-201ENST00000458838 81 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AC116533.1-201ENST00000459748 321 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 HIGD1AP13-201ENST00000509878 289 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RNU6-941P-201ENST00000516346 108 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 snoU109.6-201ENST00000516831 118 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RNU6-64P-201ENST00000517119 105 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 RNA5SP373-201ENST00000517271 95 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AC012400.1-201ENST00000518452 381 ntBASIC6.26□□□□□ -1.41
RNF20Q5VTR2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF20Q5VTR2 AC100812.1-201ENST00000607622 580 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms