Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 RNU6-178P-201ENST00000384631 104 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AP000705.1-201ENST00000454567 350 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 KPNA2P1-201ENST00000458289 1591 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 SET-203ENST00000372688 801 ntTSL 2 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 OR5H15-201ENST00000383696 930 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 U3.37-201ENST00000408528 213 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 USP9YP8-201ENST00000441913 500 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC233279.1-201ENST00000455300 423 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AC104090.1-201ENST00000506341 1171 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.38□□□□□ -2.19
VPS13DQ5THJ4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 MIR6073-201ENST00000352083 89 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC009414.1-201ENST00000427200 443 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC009238.1-201ENST00000442165 424 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC009237.6-201ENST00000446969 424 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 RNU1-51P-201ENST00000365345 176 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 Z82205.1-201ENST00000428456 297 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 RPL39P40-201ENST00000445481 146 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 SNORD13-201ENST00000459299 104 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 OR4T1P-201ENST00000554933 911 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AL359198.2-201ENST00000611836 194 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC084768.2-201ENST00000622736 221 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AL606537.1-201ENST00000607258 2011 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 RPL21P75-201ENST00000396599 483 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 RPL21P1-201ENST00000399532 476 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 RPL21P28-201ENST00000401418 483 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AL592114.1-201ENST00000403842 483 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC009237.8-201ENST00000445492 379 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 RPL21P16-201ENST00000495531 483 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC005840.1-201ENST00000498412 377 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC073387.2-201ENST00000604797 784 ntBASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS13DQ5THJ4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 XIAPP3-201ENST00000312918 795 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 RN7SKP226-201ENST00000364912 300 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC023128.2-201ENST00000420880 1223 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 MTCO3P21-201ENST00000430791 643 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AL451074.3-201ENST00000437709 472 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC003989.2-201ENST00000440224 169 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC107398.1-201ENST00000486904 505 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 MTCYBP37-201ENST00000510642 1133 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AP000790.1-201ENST00000528891 737 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC017076.1-201ENST00000607613 578 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 MIR219B-201ENST00000637023 88 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 SDR42E1P3-201ENST00000438345 502 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC009961.3-201ENST00000449832 765 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 RNU6-250P-201ENST00000516958 103 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 MIR4448-201ENST00000584360 86 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 VN1R80P-201ENST00000597126 338 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 MTND5P7-201ENST00000413558 1798 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AL109809.4-201ENST00000603520 2185 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 GSTA11P-201ENST00000452866 669 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AC092436.3-201ENST00000511788 257 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 AL589994.2-201ENST00000621124 579 ntBASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS13DQ5THJ4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms