Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC067747.1-201ENST00000608026 250 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 AC091953.2-201ENST00000623979 160 ntBASIC1.32□□□□□ -2.2
UBR4Q5T4S7 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBR4Q5T4S7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC009541.1-201ENST00000438279 2662 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AP000526.1-201ENST00000603308 1388 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 GAPDHP27-201ENST00000447427 1020 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U3.23-201ENST00000391132 200 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 SNORA40.18-201ENST00000391200 128 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC105313.1-201ENST00000509121 353 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 RNU2-58P-201ENST00000516403 183 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 SNRPGP18-201ENST00000553000 214 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC233702.9-201ENST00000581528 203 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 RNU2-2P-201ENST00000410396 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 EBAG9P1-201ENST00000418955 543 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 MTCYBP12-201ENST00000440559 1134 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 OR5AK3P-201ENST00000527486 1297 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.15-201ENST00000611544 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.16-201ENST00000613119 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.12-201ENST00000613778 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.20-201ENST00000613956 192 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.9-201ENST00000615427 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.11-201ENST00000616345 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.2-201ENST00000616535 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.3-201ENST00000617785 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.19-201ENST00000618602 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 RNU2-1-201ENST00000618664 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.6-201ENST00000619225 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.5-201ENST00000619465 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 U2.10-201ENST00000620268 191 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.31□□□□□ -2.2
UBR4Q5T4S7 MIR6767-201ENST00000637302 66 ntBASIC1.31□□□□□ -2.2
UBR4Q5T4S7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 RNU1-91P-201ENST00000364746 163 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 RPL23AP4-201ENST00000427757 463 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AL021407.1-201ENST00000404531 386 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 PGBD4P6-201ENST00000421501 610 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 NPM1P29-201ENST00000483112 803 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 OR4P1P-201ENST00000530808 1136 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AC067805.1-201ENST00000559344 470 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 POLHP1-201ENST00000411806 470 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 RPL32P35-201ENST00000415214 394 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 RPS15AP28-201ENST00000435088 386 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 RPS29P6-201ENST00000438196 145 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 RPL23AP63-201ENST00000498752 471 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 Y_RNA.700-201ENST00000516806 100 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 RNU6-1027P-201ENST00000383998 107 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 SYT14P1-201ENST00000481459 721 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 AC006111.3-201ENST00000622137 383 ntBASIC1.3□□□□□ -2.2
UBR4Q5T4S7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UBR4Q5T4S7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AL139156.1-201ENST00000412785 841 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC025445.1-201ENST00000502728 300 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 ACTR6P1-201ENST00000514311 1104 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AP000919.1-202ENST00000581139 1264 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms