Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 AC068790.6-201ENST00000602558 258 ntBASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 AL139286.2-201ENST00000606838 396 ntBASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 AC015967.1-201ENST00000619893 476 ntBASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 AC092656.1-203ENST00000624134 423 ntBASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 AC092184.1-201ENST00000625042 715 ntBASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 MTND5P24-201ENST00000438892 1767 ntBASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC39AQ5SRH9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 RPL21P132-201ENST00000331267 462 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 U3.39-201ENST00000408569 239 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 RN7SKP53-201ENST00000411337 315 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 MTCO1P21-201ENST00000416634 589 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC093698.1-201ENST00000423843 571 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 ATP5JP1-201ENST00000431631 322 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 LARP1BP3-201ENST00000437229 869 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 CYCSP43-201ENST00000438233 310 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 TRIM60P18-201ENST00000441518 828 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 SLC31A1P1-201ENST00000451221 567 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC013828.1-201ENST00000481845 158 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC108078.3-201ENST00000502633 489 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 FTH1P9-201ENST00000513251 355 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC022880.1-201ENST00000534017 973 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC007458.1-201ENST00000542812 373 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 SERPINE4P-201ENST00000554978 281 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC012414.6-201ENST00000568241 401 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC099489.2-201ENST00000574976 260 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 VN1R92P-201ENST00000598511 928 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC239868.4-201ENST00000608318 671 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC069200.1-201ENST00000609511 323 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC106028.5-201ENST00000610332 395 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC009878.1-201ENST00000621819 340 ntBASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TTC39AQ5SRH9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 RNU6-251P-201ENST00000363235 104 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 RNU6-216P-201ENST00000363282 104 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 RNA5SP42-201ENST00000364278 115 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 RNU6-1122P-201ENST00000384449 107 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 MIR1183-201ENST00000408856 89 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 Z99497.1-201ENST00000421282 135 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 MTCO2P34-201ENST00000421994 607 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 USP9YP7-201ENST00000436723 430 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AC241584.1-201ENST00000438469 1241 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 PPIAP3-201ENST00000450588 505 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 CYCSP35-201ENST00000451978 304 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 USP9YP32-201ENST00000452432 430 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 RPL30P9-201ENST00000465586 330 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 MTATP6P22-201ENST00000507369 598 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AC010625.1-201ENST00000511296 403 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AC090502.2-201ENST00000549267 280 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 CBX3P5-201ENST00000552017 521 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AL391156.1-201ENST00000554965 554 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 MIR3611-201ENST00000584484 83 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AC008507.1-201ENST00000587506 734 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 LLPHP1-201ENST00000603571 367 ntBASIC4.3□□□□□ -1.72
TTC39AQ5SRH9 AC069304.2-201ENST00000605154 435 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms