Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.4□□□□□ -1.86
PDLIM3Q53GG5 AC018555.1-201ENST00000567548 1980 ntBASIC3.4□□□□□ -1.86
PDLIM3Q53GG5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
PDLIM3Q53GG5 AC008033.1-201ENST00000216407 1162 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RNU6-462P-201ENST00000362659 105 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RNU6-343P-201ENST00000364709 104 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 MT-TH-201ENST00000387441 69 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 U3.29-201ENST00000391296 212 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 HMGB1P17-201ENST00000403495 628 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 SNORA3C-201ENST00000408792 125 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RNA5SP56-201ENST00000410277 118 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RN7SKP56-201ENST00000410513 331 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC109780.2-201ENST00000413467 845 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC092447.6-201ENST00000414578 210 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 TOMM22P1-201ENST00000418578 312 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC007742.1-201ENST00000425789 329 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 ATP5HP2-201ENST00000433885 485 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 ELOCP26-201ENST00000436067 329 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 ARPC3P5-201ENST00000448802 534 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 HMGB3P22-202ENST00000451823 572 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RNU7-170P-201ENST00000459303 61 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC093677.1-201ENST00000514414 678 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC117532.1-201ENST00000514638 323 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RN7SKP289-201ENST00000517244 295 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 HIGD1AP10-201ENST00000527837 282 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC023161.2-201ENST00000551218 780 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 RPL23AP92-201ENST00000603609 255 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AL358072.1-201ENST00000604156 575 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC114878.2-201ENST00000604863 1251 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC105129.3-201ENST00000605455 485 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC005000.2-201ENST00000605468 310 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC080013.4-201ENST00000607624 649 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC093783.1-201ENST00000612976 329 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 AC073530.2-201ENST00000623987 261 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDLIM3Q53GG5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AC007256.1-201ENST00000392253 2765 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 Y_RNA.500-201ENST00000384466 111 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 SKINT1L-201ENST00000401057 817 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AC011742.1-201ENST00000431448 434 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 LARP1BP3-201ENST00000437229 869 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 CYCSP32-201ENST00000440548 321 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 MTND1P30-201ENST00000441241 901 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 Z83846.1-201ENST00000446798 265 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 RPS24P6-201ENST00000452670 400 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AL122001.1-201ENST00000457027 370 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AP001992.1-205ENST00000462248 379 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
PDLIM3Q53GG5 AC068724.1-201ENST00000487100 792 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms