Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 ELOCP26-201ENST00000436067 329 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 HSPE1P28-201ENST00000443139 211 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.94□□□□□ -1.94
RAB40BQ12829 SSXP4-201ENST00000451349 245 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 UQCRHP3-201ENST00000451503 251 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 MTCO3P11-201ENST00000455103 774 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 PTGES3P5-201ENST00000455109 434 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 RPL18AP17-201ENST00000455326 198 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 U8.18-201ENST00000459285 133 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AC005410.1-202ENST00000460347 485 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AP001992.1-205ENST00000462248 379 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AC092754.2-201ENST00000463506 460 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC017015.1-201ENST00000477387 286 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.94□□□□□ -1.94
RAB40BQ12829 RN7SL283P-201ENST00000489055 303 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.94□□□□□ -1.94
RAB40BQ12829 RNY4P37-201ENST00000516225 96 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AC022861.1-201ENST00000522981 663 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 MTCO1P49-201ENST00000523429 802 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC005476.1-201ENST00000554427 397 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RAB40BQ12829 AP001029.3-201ENST00000588063 596 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.94□□□□□ -1.94
RAB40BQ12829 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AL031176.1-201ENST00000604554 466 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 VIS1.1-201ENST00000610517 203 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 PLCE1P1-201ENST00000622094 305 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC127502.3-201ENST00000636170 1206 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.94□□□□□ -1.94
RAB40BQ12829 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.94□□□□□ -1.94
RAB40BQ12829 AC093831.2-201ENST00000624393 3427 ntBASIC2.94□□□□□ -1.94
RAB40BQ12829 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 AC008264.2-201ENST00000610193 3731 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RAB40BQ12829 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.93□□□□□ -1.94
RAB40BQ12829 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RAB40BQ12829 RNU6-173P-201ENST00000364215 104 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40BQ12829 AL591034.1-201ENST00000407447 340 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 CYCSP19-201ENST00000411715 316 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AC245054.2-201ENST00000415639 319 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AL356320.2-201ENST00000417263 507 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 MTCO1P39-201ENST00000426148 480 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 EZH2P1-201ENST00000431167 291 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 MTND4P6-201ENST00000438297 472 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AC009969.1-201ENST00000438726 172 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 ATP5C1P1-201ENST00000441945 895 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40BQ12829 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40BQ12829 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40BQ12829 ZNF886P-201ENST00000450781 723 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 AC073387.1-201ENST00000453261 709 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40BQ12829 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 RPS23P3-201ENST00000470993 430 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40BQ12829 RPS27AP1-201ENST00000475545 471 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.93□□□□□ -1.94
RAB40BQ12829 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40BQ12829 UBE2V1P12-201ENST00000503954 474 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40BQ12829 XKRY-201ENST00000510392 1100 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.93□□□□□ -1.94
RAB40BQ12829 APOOP4-201ENST00000513530 597 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 RN7SKP18-201ENST00000516005 275 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.93□□□□□ -1.94
RAB40BQ12829 CR383656.7-201ENST00000548164 174 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
RAB40BQ12829 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40BQ12829 AC023813.2-201ENST00000564321 469 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 CCDC58P3-201ENST00000590792 430 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 MTND3P19-201ENST00000603825 345 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AL109618.2-201ENST00000605527 211 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AL390240.1-201ENST00000612950 384 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 AL110115.1-201ENST00000614396 364 ntBASIC2.93□□□□□ -1.94
RAB40BQ12829 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RAB40BQ12829 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40BQ12829 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RAB40BQ12829 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40BQ12829 MTND5P19-201ENST00000424872 1794 ntBASIC2.92□□□□□ -1.94
RAB40BQ12829 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40BQ12829 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms