Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL021407.1-201ENST00000404531 386 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 USP9YP8-201ENST00000441913 500 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 AP000852.1-201ENST00000472460 573 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 RNU6-250P-201ENST00000516958 103 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 AC093331.1-201ENST00000521474 169 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 AC010678.1-201ENST00000614118 713 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 MTND5P27-201ENST00000428871 1720 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HMGXB3Q12766 AC066616.2-201ENST00000559334 1481 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 RN7SKP44-201ENST00000363602 316 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 RNU2-22P-201ENST00000411266 212 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 AL390023.1-201ENST00000428836 262 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGXB3Q12766 AC060766.3-201ENST00000591442 263 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 MIR6715B-201ENST00000637172 77 ntBASIC3.44□□□□□ -1.86
HMGXB3Q12766 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HMGXB3Q12766 EXOC5P1-201ENST00000510543 1969 ntBASIC3.43□□□□□ -1.86
HMGXB3Q12766 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGXB3Q12766 AIMP1P1-201ENST00000418670 937 ntBASIC3.43□□□□□ -1.86
HMGXB3Q12766 SDCBPP3-201ENST00000419629 891 ntBASIC3.43□□□□□ -1.86
HMGXB3Q12766 NDUFA5P4-201ENST00000436704 385 ntBASIC3.43□□□□□ -1.86
HMGXB3Q12766 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.43□□□□□ -1.86
HMGXB3Q12766 Y_RNA.670-201ENST00000516255 105 ntBASIC3.43□□□□□ -1.86
HMGXB3Q12766 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.43□□□□□ -1.86
HMGXB3Q12766 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.43□□□□□ -1.86
HMGXB3Q12766 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.43□□□□□ -1.86
HMGXB3Q12766 LRRC77P-213ENST00000637727 880 ntBASIC3.43□□□□□ -1.86
HMGXB3Q12766 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
HMGXB3Q12766 NDUFB4P5-201ENST00000415445 361 ntBASIC3.42□□□□□ -1.86
HMGXB3Q12766 AC093151.1-201ENST00000427711 313 ntBASIC3.42□□□□□ -1.86
HMGXB3Q12766 YWHAZP7-201ENST00000436906 631 ntBASIC3.42□□□□□ -1.86
HMGXB3Q12766 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.42□□□□□ -1.86
HMGXB3Q12766 MLLT10P2-201ENST00000506434 249 ntBASIC3.42□□□□□ -1.86
HMGXB3Q12766 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.42□□□□□ -1.86
HMGXB3Q12766 HIGD1AP10-201ENST00000527837 282 ntBASIC3.42□□□□□ -1.86
HMGXB3Q12766 AC010546.1-201ENST00000569391 485 ntBASIC3.42□□□□□ -1.86
HMGXB3Q12766 TPMTP1-201ENST00000592307 737 ntBASIC3.42□□□□□ -1.86
HMGXB3Q12766 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HMGXB3Q12766 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGXB3Q12766 SET-203ENST00000372688 801 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGXB3Q12766 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGXB3Q12766 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGXB3Q12766 AC092473.1-201ENST00000441098 221 ntBASIC3.41□□□□□ -1.86
HMGXB3Q12766 AC011352.3-201ENST00000505162 593 ntBASIC3.41□□□□□ -1.86
HMGXB3Q12766 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGXB3Q12766 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGXB3Q12766 PSMA6P4-201ENST00000603247 718 ntBASIC3.41□□□□□ -1.86
HMGXB3Q12766 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGXB3Q12766 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.4□□□□□ -1.86
HMGXB3Q12766 AC006254.3-201ENST00000603353 884 ntBASIC3.4□□□□□ -1.86
HMGXB3Q12766 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HMGXB3Q12766 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGXB3Q12766 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.87
HMGXB3Q12766 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGXB3Q12766 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGXB3Q12766 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGXB3Q12766 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HMGXB3Q12766 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGXB3Q12766 TRMT112P2-201ENST00000512910 132 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 AP000889.2-201ENST00000532684 490 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGXB3Q12766 AC026241.1-201ENST00000517873 2142 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 AL606537.1-201ENST00000607258 2011 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 CDC27P2-201ENST00000425026 1922 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGXB3Q12766 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.39□□□□□ -1.87
HMGXB3Q12766 AC067805.1-201ENST00000559344 470 ntBASIC3.39□□□□□ -1.87
HMGXB3Q12766 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGXB3Q12766 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGXB3Q12766 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGXB3Q12766 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGXB3Q12766 SAR1AP2-201ENST00000392696 594 ntBASIC3.38□□□□□ -1.87
HMGXB3Q12766 GAPDHP27-201ENST00000447427 1020 ntBASIC3.38□□□□□ -1.87
HMGXB3Q12766 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.38□□□□□ -1.87
HMGXB3Q12766 RPS29P12-201ENST00000460178 152 ntBASIC3.38□□□□□ -1.87
HMGXB3Q12766 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGXB3Q12766 AC067852.7-201ENST00000623270 535 ntBASIC3.38□□□□□ -1.87
HMGXB3Q12766 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGXB3Q12766 AC010329.2-201ENST00000595195 2737 ntBASIC3.38□□□□□ -1.87
HMGXB3Q12766 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGXB3Q12766 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGXB3Q12766 AL353746.1-201ENST00000566293 6881 ntBASIC3.37□□□□□ -1.87
HMGXB3Q12766 AL109809.4-201ENST00000603520 2185 ntBASIC3.37□□□□□ -1.87
HMGXB3Q12766 MIR1294-201ENST00000408503 142 ntBASIC3.37□□□□□ -1.87
HMGXB3Q12766 MTCO3P30-201ENST00000426425 670 ntBASIC3.37□□□□□ -1.87
HMGXB3Q12766 RPL23AP16-201ENST00000441715 421 ntBASIC3.37□□□□□ -1.87
HMGXB3Q12766 RNU7-95P-201ENST00000459222 64 ntBASIC3.37□□□□□ -1.87
HMGXB3Q12766 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
HMGXB3Q12766 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGXB3Q12766 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGXB3Q12766 MIR5089-201ENST00000580047 84 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms