Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 COX6CP8-201ENST00000522620 226 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.38□□□□□ -2.03
H3F3AP84243 AP001804.3-201ENST00000525146 880 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 SNRPGP16-201ENST00000533275 226 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.38□□□□□ -2.03
H3F3AP84243 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.38□□□□□ -2.03
H3F3AP84243 AC009268.1-201ENST00000561352 1203 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.38□□□□□ -2.03
H3F3AP84243 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.38□□□□□ -2.03
H3F3AP84243 AC020895.1-201ENST00000595362 272 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 AC025588.3-201ENST00000604182 274 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 AC107905.1-201ENST00000616204 426 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.38□□□□□ -2.03
H3F3AP84243 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.38□□□□□ -2.03
H3F3AP84243 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.38□□□□□ -2.03
H3F3AP84243 FRG1DP-201ENST00000635586 771 ntBASIC2.38□□□□□ -2.03
H3F3AP84243 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
H3F3AP84243 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
H3F3AP84243 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.38□□□□□ -2.03
H3F3AP84243 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.37□□□□□ -2.03
H3F3AP84243 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
H3F3AP84243 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
H3F3AP84243 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
H3F3AP84243 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 RNU6-1180P-201ENST00000364935 107 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 RNU1-100P-201ENST00000365255 165 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H3F3AP84243 RNU6-1226P-201ENST00000384317 107 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H3F3AP84243 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
H3F3AP84243 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
H3F3AP84243 AC092638.1-201ENST00000411966 1275 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AL513477.1-202ENST00000417061 214 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 AC073310.1-201ENST00000423226 1033 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AC019097.1-201ENST00000424783 735 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AC063976.3-201ENST00000426849 329 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AC114973.1-201ENST00000429057 632 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AL590664.1-201ENST00000448065 339 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.37□□□□□ -2.03
H3F3AP84243 AC234775.1-201ENST00000454247 670 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 AC027673.1-201ENST00000456245 405 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AC006445.2-201ENST00000510061 472 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.37□□□□□ -2.03
H3F3AP84243 SNORA31.8-201ENST00000516327 108 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.37□□□□□ -2.03
H3F3AP84243 OR10V3P-201ENST00000525712 725 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.37□□□□□ -2.03
H3F3AP84243 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.37□□□□□ -2.03
H3F3AP84243 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
H3F3AP84243 AC090666.1-201ENST00000578241 445 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.37□□□□□ -2.03
H3F3AP84243 DPRXP5-201ENST00000604662 539 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AL137843.1-201ENST00000605078 385 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 SNHG22-203ENST00000617833 660 ntBASIC2.37□□□□□ -2.03
H3F3AP84243 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
H3F3AP84243 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
H3F3AP84243 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
H3F3AP84243 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.36□□□□□ -2.03
H3F3AP84243 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
H3F3AP84243 AC062016.1-201ENST00000355719 319 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 RNU6-989P-201ENST00000362756 107 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AL356057.2-201ENST00000403318 432 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AL137014.1-201ENST00000420490 1226 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.36□□□□□ -2.03
H3F3AP84243 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.36□□□□□ -2.03
H3F3AP84243 AL645638.1-201ENST00000440519 361 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AL831737.1-201ENST00000441288 271 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.36□□□□□ -2.03
H3F3AP84243 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
H3F3AP84243 AL034418.1-201ENST00000448675 860 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.36□□□□□ -2.03
H3F3AP84243 SNORD109B-201ENST00000458961 67 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 SNORD109A-201ENST00000459128 67 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.36□□□□□ -2.03
H3F3AP84243 RNA5SP356-201ENST00000515972 94 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 SNORA31.21-201ENST00000517180 77 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.36□□□□□ -2.03
H3F3AP84243 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.36□□□□□ -2.03
H3F3AP84243 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.36□□□□□ -2.03
H3F3AP84243 MIR4635-201ENST00000583759 79 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 GLUD1P4-201ENST00000590914 418 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 VN1R90P-201ENST00000595717 726 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AC106900.2-201ENST00000604994 317 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AC019159.1-201ENST00000605094 187 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.36□□□□□ -2.03
H3F3AP84243 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.36□□□□□ -2.03
H3F3AP84243 AC138915.1-201ENST00000565427 1685 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 AC104446.1-201ENST00000613728 1321 ntBASIC2.36□□□□□ -2.03
H3F3AP84243 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
H3F3AP84243 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms