Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRAMEP78395 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEP78395 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEP78395 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRAMEP78395 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEP78395 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 MTCO1P17-201ENST00000411522 491 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AC009237.5-201ENST00000414271 501 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 CRYBB2P1-203ENST00000415709 538 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.79□□□□□ -1.8
PRAMEP78395 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEP78395 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEP78395 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.79□□□□□ -1.8
PRAMEP78395 AL831737.1-201ENST00000441288 271 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC239367.2-201ENST00000447309 705 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AP000542.1-201ENST00000448473 371 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.79□□□□□ -1.8
PRAMEP78395 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 RN7SL323P-201ENST00000494712 295 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.79□□□□□ -1.8
PRAMEP78395 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.79□□□□□ -1.8
PRAMEP78395 MRPS36P5-201ENST00000551909 298 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AC007954.1-201ENST00000554198 494 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC007224.1-201ENST00000564410 144 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.79□□□□□ -1.8
PRAMEP78395 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.79□□□□□ -1.8
PRAMEP78395 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 MIR544B-201ENST00000582372 78 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEP78395 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEP78395 AP001330.4-201ENST00000604350 154 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AL022099.1-201ENST00000604551 712 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 VIS1.1-201ENST00000610517 203 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 MIR6875-201ENST00000617506 72 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AL356266.1-201ENST00000623311 483 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 AC079248.2-201ENST00000623779 326 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEP78395 PCMTD1P7-201ENST00000634506 357 ntBASIC3.79□□□□□ -1.8
PRAMEP78395 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEP78395 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRAMEP78395 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEP78395 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEP78395 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEP78395 RPS4XP5-202ENST00000449995 1334 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEP78395 PPIAP31-201ENST00000405422 495 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEP78395 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEP78395 MTND2P18-201ENST00000419962 1030 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 BEND7P1-201ENST00000422058 457 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEP78395 AL445669.1-201ENST00000426743 755 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.78□□□□□ -1.8
PRAMEP78395 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEP78395 AC091862.1-201ENST00000438016 1100 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.78□□□□□ -1.8
PRAMEP78395 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PRAMEP78395 SNORA71B-202ENST00000439232 272 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 SETD6P1-201ENST00000444575 317 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 RAC1P7-201ENST00000445367 377 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC006480.1-201ENST00000449887 378 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEP78395 MTCO3P20-201ENST00000454926 688 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 SNRPGP3-201ENST00000469405 227 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AL024509.2-201ENST00000493462 493 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC106872.3-201ENST00000495104 446 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 POU5F1P7-201ENST00000508759 541 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.78□□□□□ -1.8
PRAMEP78395 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEP78395 AP004247.1-201ENST00000531556 1289 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 SNRPGP16-201ENST00000533275 226 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 CYCSP30-201ENST00000546447 172 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.78□□□□□ -1.8
PRAMEP78395 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEP78395 AC053481.4-201ENST00000583164 216 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC020910.2-201ENST00000603635 610 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC011451.2-201ENST00000604303 598 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC103710.3-201ENST00000608157 948 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC004223.4-201ENST00000612426 332 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 AC122133.1-201ENST00000613964 233 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 RNA5SP196-201ENST00000625967 102 ntBASIC3.78□□□□□ -1.8
PRAMEP78395 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms